| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4535 |
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| Symbol | |
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| ID | 4583093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 16049 |
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| End bp | 18385 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771842 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_918295 |
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| Protein GI | 119387261 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.453333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC AAATCAGCCG TATCGCCCTG ATCGCGGCAC TTGGCGGCGC CGGGCTTGTC
GCGGCGCATG GGCCCGTCGC CGTGGCGCAG GAGGCCGCGC AGACCCGCGC CTTCGACATT
CCGGCGCAAA GCCTGAACGG CGCGCTTTTG CGTTTCGCGC GCGAGGCCGG GGTGCAGGTG
CTTTACGACA CCGCCCTGGT GCAGGGCCGC CAAAGCCCCG GCGTCAGCGG CCGGATGACC
ACCAGCGCCG CGCTGGAGCA ATTGCTGCAA GGCTCGGGGC TGGGGTTCCG GGTGAACTCG
CCGCAATCGA TCTCGCTGAC GGCCCCGGCC GCTGCCGCCG TCGAATCCGA CGCCAATACC
GTCGTGCTGG ACGAGATCCG GCTGGACGCG GGCGGCGCGG TGACCGAAGG CACCGGCAGC
TATACGACCG GCCTGACCAC GGTGGCGACC GGCCTGCCGC TGACCATGAA GGAAACCCCG
CAATCGATCA GCGTCGCCAC CCGGCAAAAG ATGGATGACC GCAACCAGCG CAGCATTTCC
GAGGTGCTGG AGGATACCAC CGGCATTACC GTCATGCCGA TGGATACCGA GCGGCGCAGC
GTCTATGCGC GCGGCTTTTC CAGCCCGACC TACATGGTCG ACGGCCTGCC GGTCTGGTAT
CGCATCCAGT ATGGCTCCGG CCCCAGCATC GCCGATACCG CGATCTATGA CCGCGTCGAG
GTGCTGCGCG GCGCCACCGG GCTGATGGCC GGGGCGGGCG ATCCCTCGGT CGTCATCAAC
ATGGTGCGCA AGACGCCGAC CTCGGCGCCG CAGACCCGGC TGCGCTTTTC GGCCGGAAGC
TGGAATACGT TGCGCAGCGA CCTGGACATC AGCGGCCCGC TGAACGCCGA TGCCTCGATC
CGGGGCCGGT TCGTGGCGGC GCATGAGCAG GGCGATTCCT GGCTGGACCG TTACGAGCGG
CGCAAGACCG TGCTCTACGG CGTGGTCGAG GCCGATGTCG GCGATGCCGG CACGCTGACG
GCGGGCTATG ATTTCCAGCG CAATCGCACC CGCAACCACC AGTTCGGCGG CCTGCCGCTG
ATCGCGAATG ACGGCTCGCA GCTGGAATAC GACATCCACA CCAATGCCGG CGGCGGCAAT
CTGCCGCTGA CCCAGACCAC GCAGACCCTG TTCCTGCGCT ATGCCCAGGA CTTCGGCGCC
GGCTGGCAGG CAGTGGGCGA CCTGTCGCTC TACAAGGCCG AGCGCAAGGG CTATCTGGCC
TCGGCCTCCT GGGGCTCGCC CGATCCGCAG GGCTTCGGCG TGCAGACCGT GGGTGGCTAT
GCCGATACCG ATACCGAGCA GACCGCGCTG TCGCTGACCG CCTCGGGCCC GGTCGAGCTG
GGGGGCCGCA GCCATGACCT GCGCTTCGGC ATCACCGGCA ATTGGGGCAA GGACAACCAC
AAGGCCTATT CGGCCTTCGA CGGGACCGAT ATCGACTATC AGCCGATCAC CGGCTCGATC
TTCGACTGGG ACGGGTATGT GCCGAACCTG GTCCAGCAGG CCGGCTATGT CAGCTATGTC
AGCAATACCA AGATCGACCA GGTCGCGGCC TATGGCTCGG GCCGCTTCGG CCTGACCGAC
CGGCTGAACC TGATCGCCGG CGCGCGCGTG GTCTGGTACG ACTACGACTA TACCACCGAC
AGCCGCAGCA GCGGCACGAC TACGCATCAG CAGATCAGCC GCAACGGCGA ATGGATCCCC
TATGCCGGGC TGACCTATGA CCTGAACGAG GACTGGTCGG TCTATGCCAG CTATACCCGG
GTCTTCAAGC AGGCCAGCTA TCGCGACAAG GACAACAGGA TCGTCGAACC GACCACCGGC
TCGAATTACG AGCTGGGCAC CAAGGCCAGC CTTGCCGGCG ACCGGCTGAA CTTTGCGGCG
GCGGTCTATC TGCTGGAACA GGACAACCTG CCGGTCCGCG ACCGCAGCGT CAGCTATCAG
TTGCCCGACG GCTCGAACCC CTACATGTCC ATCGACGGCA CCCGGACCAA GGGCTTCGAG
ATGGAACTGG CGGGCGAGGT TCGCCCGAAC ATCCAGCTTG CGGCAAGCTA TGCCTGGACC
GATGCCGAGG ACGGCGACGG CCAGCGCATC TCGACCGTCA CCCCGCGCCA TTCGGTCAAG
CTGTCGGGGA TCTATGCGTT CGAATCCATG CCGCTGACCC TGGGCGCCAG CCTGCGCTGG
CAAAGCGCCA TCGAGAACAC CTGGGTCTGG CCGGTCACCG GGACGGCACG GCAAGGTCGC
GCTGACGCCT GCGCAGTTGT CGATGTTGCT GGAAGGGATC GACTGGCGGG CTCCTGA
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| Protein sequence | MKTQISRIAL IAALGGAGLV AAHGPVAVAQ EAAQTRAFDI PAQSLNGALL RFAREAGVQV
LYDTALVQGR QSPGVSGRMT TSAALEQLLQ GSGLGFRVNS PQSISLTAPA AAAVESDANT
VVLDEIRLDA GGAVTEGTGS YTTGLTTVAT GLPLTMKETP QSISVATRQK MDDRNQRSIS
EVLEDTTGIT VMPMDTERRS VYARGFSSPT YMVDGLPVWY RIQYGSGPSI ADTAIYDRVE
VLRGATGLMA GAGDPSVVIN MVRKTPTSAP QTRLRFSAGS WNTLRSDLDI SGPLNADASI
RGRFVAAHEQ GDSWLDRYER RKTVLYGVVE ADVGDAGTLT AGYDFQRNRT RNHQFGGLPL
IANDGSQLEY DIHTNAGGGN LPLTQTTQTL FLRYAQDFGA GWQAVGDLSL YKAERKGYLA
SASWGSPDPQ GFGVQTVGGY ADTDTEQTAL SLTASGPVEL GGRSHDLRFG ITGNWGKDNH
KAYSAFDGTD IDYQPITGSI FDWDGYVPNL VQQAGYVSYV SNTKIDQVAA YGSGRFGLTD
RLNLIAGARV VWYDYDYTTD SRSSGTTTHQ QISRNGEWIP YAGLTYDLNE DWSVYASYTR
VFKQASYRDK DNRIVEPTTG SNYELGTKAS LAGDRLNFAA AVYLLEQDNL PVRDRSVSYQ
LPDGSNPYMS IDGTRTKGFE MELAGEVRPN IQLAASYAWT DAEDGDGQRI STVTPRHSVK
LSGIYAFESM PLTLGASLRW QSAIENTWVW PVTGTARQGR ADACAVVDVA GRDRLAGS
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