Gene Pden_4469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4469 
Symbol 
ID4583019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1682979 
End bp1684478 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID639771776 
Productreplicative DNA helicase 
Protein accessionYP_918229 
Protein GI119387174 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT TGCGCGCCGT CGAAGTCAGG AAGCCCGGCG AGATCGCCGA GGCCGCCGCC 
GCGCAGGCGG TGCCCTTCTC GATCGAGGCC GAGCAGCAGT TGCTGGGTGC GCTCCTGACC
AATAACGAGG TCTACGACCA CGTTTCCCGC ATCATCCAGG CGCGGCATTT CTACGATCCG
GTCCATCGAC GCATCTACGA GATCTGCGCC GAGCGCATCG CCAGGAACGC GCTGGCAAGC
CCCGTGACGA TCAAGGCCTT CATGGAGCAC GACGCCGGGC TCAAGGAATT GGGCGGCCCG
GCCTATCTGG CGCGGCTGGC GGGGGCGGCG ATCTCGTCCC ATGCCGCACG CGACTATGCG
CAGATGATCC GCGAATTCGC CCTGCGCCGC GAGTTGATCG GGCTGGGCCA GGACATCGCC
GCGCGTGCCT CGACCGTCTC GGTCAGCGAT TCCGCCGAGG AGCAGATCAA GGAAGCCGAG
CAGGTCCTCT ACAAGCTCGG CGAGCAGGGC GTGGCCGAAC GCGGGTTCCA GAGTTTCCTT
GCCGCCGTCA CCGGGGCCCT GAACGCCGCC AATGCCGCCT TCAGCCGGGG CGGCGGGCTG
TCGGGCGTCT CGACCGGGCT GGTCGACCTC GACGGCAAGA TGGGCGGGTT GAACCGATCG
GACCTGATCA TCCTGGCCGG CCGGCCCTCG ATGGGCAAGA CCTCGCTGGC GACCAACATC
GCCTTCAACG TCGCCAAGTC GCACAAGCTG GGCGAATTGC CCGACGGCAG CCATGGCACG
GTGGCGGGGG GCGTCGTCGG CTTCTTCAGC CTGGAGATGT CGGCAGAGCA GCTGGCCGCG
CGCATCCTGT CCGAAGCCGC CGAGGTTCCC AGCGAGGCGA TCCGCCGCGG CGACATGACC
GAGGACGAGT TCCGCCGCTT CGTCAAGGCC GCGCATGACT TGCAGAACTG CCCGCTTTAC
ATCGACGATA CGCCGGCACT GCCGATCAAT CAGTTGGCCG CGCGTGCCCG CAAGCTCAAG
CGCACCATGG GGCTGGACCT GCTGATCGTG GACTATCTCC AGCTTCTGCG CGCAGCCTCG
GCCAAGGACA GCCGCGTCAA CGAGGTCAGC GAGATCACCC AGGGCCTCAA GGCCGTCGCC
AAGGAACTGG ACATCCCCGT CATCGCCCTG TCGCAGCTGT CGCGCCAGGT CGAGGCGCGC
GAGGACAAGC GCCCGCAGCT TTCCGACCTG CGCGAATCCG GCAGCATCGA GCAGGACGCC
GACATCGTGA TGTTCGTCTT CCGCGAGGAA TATTACCGCG AGCGCGAGAA GCCCGCCGAC
CACGACCTCG ACAAGATGGC CACCTGGCAG CAGGTCATGG AATCCTGCCA CGGCAAGGCC
GAGGTCATCA TCGGCAAGCA GCGCCACGGC CCCATCGGCA CGGTCGAGCT GTCCTTCGAG
GGCCGCTTCA CCCGCTTCGG AAACCTGGAA AAACACCGCA GCTGGGATCC TGCCGAATGA
 
Protein sequence
MSELRAVEVR KPGEIAEAAA AQAVPFSIEA EQQLLGALLT NNEVYDHVSR IIQARHFYDP 
VHRRIYEICA ERIARNALAS PVTIKAFMEH DAGLKELGGP AYLARLAGAA ISSHAARDYA
QMIREFALRR ELIGLGQDIA ARASTVSVSD SAEEQIKEAE QVLYKLGEQG VAERGFQSFL
AAVTGALNAA NAAFSRGGGL SGVSTGLVDL DGKMGGLNRS DLIILAGRPS MGKTSLATNI
AFNVAKSHKL GELPDGSHGT VAGGVVGFFS LEMSAEQLAA RILSEAAEVP SEAIRRGDMT
EDEFRRFVKA AHDLQNCPLY IDDTPALPIN QLAARARKLK RTMGLDLLIV DYLQLLRAAS
AKDSRVNEVS EITQGLKAVA KELDIPVIAL SQLSRQVEAR EDKRPQLSDL RESGSIEQDA
DIVMFVFREE YYREREKPAD HDLDKMATWQ QVMESCHGKA EVIIGKQRHG PIGTVELSFE
GRFTRFGNLE KHRSWDPAE