Gene Pden_4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4449 
Symbol 
ID4582999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1657849 
End bp1660461 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content73% 
IMG OID639771756 
Productmolybdopterin oxidoreductase 
Protein accessionYP_918209 
Protein GI119387154 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1251] NAD(P)H-nitrite reductase
[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCCGCACCAC CTGTCCCTAT TGCGGCGTGG GCTGCGGCGT GCTGGCGACG 
CCCGACGGCA AGGGCGGGCT GGGCATTGCG GGCGATCCCG ATCATCCCGC GAACCGGGGC
CGGCTTTGCG TCAAGGGCTC GGCGCTTGGC GAGACGGTCG GCCATGGCGG CCGGCTGCTC
GCCCCGCGCA TCCACGGGCG CGAGGCCGGC TGGGACGAGG CGCTGGACCT GGTCGCGCAC
CGCTTCCGCG ACACCATTGC CGAGCACGGG CCGGATTCGG TCGGCTTCTA CGTCTCGGGG
CAGCTTTTGA CCGAGGATTA CTATGTCGCC AACAAGCTGA TGAAGGGCTT CATCGGCTCG
GCCAATATCG ACACGAATTC GCGGCTTTGC ATGGCCTCGG CCGTTGCGGG GCACCGGCGG
GCCTTTGGCA CCGACACGGT GCCGGGGCTC TACGAGGATC TGGAGCTGGC CGATACGGTG
GTGCTGGTCG GCTCGAACCT GGCCTGGTGC CATCCGGTGC TTTACCAGCG GCTGGCGGCG
GCGCGCGAGG CGCGGGGCAC GCGCGTCGTG GTGGTCGATC CGCGCCGCGC CGCGAGTTGC
GACATCGCCG ACCTGCATCT GGCGCTGGCG CCGGGCGCGG ATGCGGCGCT GTTCAACCTG
CTGCTGGCCG AGATCGCGCG GCGCGGCCTG GCCGGCGGGG ATGCTGCCGC GCATCTGGAC
GGGTTCGACG AGGCGCTGGC CGCCGCGCGC GGGACGCTGC CCTCGGCCAC GGGGCTGGCG
CACAGCCAGT TGCGGCAGTT CTTCGACCTG TGGTGCGGTA GCGACAAGGT GGTGACGGTC
TGGTCGCAGG GCGTGAACCA GTCCGACAGC GGCACCGACA AGGTGAATGC GATCCTGAAC
TGCCACCTCG CCAGCGGCCG CATCGGCCGG CCGGGCATGG GCCCGTTCAG CGTCACCGGC
CAGCCCAATG CCATGGGCGG GCGCGAGGTC GGCGGGCTGG CCAACATGCT GGCCTGCCAT
CTGGAGATCG AGAACCCGGC GCATCGCGAG GCGGTGCGCG GCTTCTGGAA CGCGCCGCGC
ATGGCCGAGC GGCCGGGACT GAAGGCCGTG GACATGTTCC GCGCGGTCGA GGATGGCCGG
ATCAAGGCGC TGTGGATCAT CTGCACCAAC CCCGCCGCGA CCATGCCCGA GGCCGACCGC
GTCGCCCGCG CCATTGCCGG CTGCGATTTC GTGGCGGTCT CGGACATCAT GGCGCGGACC
GACACCACGC GGCTGGCGCA TGTCCTGCTG CCGGCGACCG GCTGGGGCGA AAAGGACGGC
ACGGTGACGA ACTCCGAGCG CCGCATCAGC CGCCAGCGCC GCACCCTCGC CCCCGCCGGG
CAGGCGCGCG ACGACTGGCG CATCCTGGCC GAGGTCGGGT GCCGCATGGG CTGGGCCGAT
GCCTTCGGCT GGACCAGCCC CGCGCAGGTC TTTGCCGAAC ATGCCGCACT GTCCGGCATC
GCAGGCGGGC TGGGCAGCGA TTTCGACATC TCGGCCCATG CCGGGATCAC CGCGGCCGAA
TATGACGCGC TGGGGCCCTT TCTGTGGCCG CAATCGGCAG GCAGGCAGGG CGGACGGTTC
TTTGGCGACG GGCGGTTCCA TACCCCCTCG GGCCGCGCGC GGATGGTCGC GGTGACGCCG
CGCCCGCCGC AGCCGGTGGA TGCGGATCAT CCGTTCCGGC TGAATACCGG CCGGGTGCGC
GATCATTGGC ACACCATGAC CCGCACCGGC CTGTCGCCGC GCCTGTCCCG CCATCTGGCC
GAGCCCTTCC TGGAGCTGCA CCCCAGCGAT GCGGCCCGGC TGGACCTGAC GCCCGCGAGC
CTTGCCGAGG TCTGCGGCCC GCATGGCCGT GCCGTGCTGC GGGTGCTGGT GACCGACCGG
GTGGCGCCGG GCCATCCCTT TGCGCCGATG CATTGGACGG GCGAGACTGC GCCCTCGGGC
CGGATCGATG CGCTGGTGCC GGGGACGGTC GATCCGGTCT CGGGCCAGCC GGCGCTGAAA
TCGGCGACGG TGGCGATCCG GCCTTTTGCC GCGCGCTGGT TCGGCTTTGC CGTCTCGGCG
GGTGCGATCC GGCCGGATTG CGACTATTGG GCGCGGGCGA CGCTGCCGCG CGGAGAGCAG
GCCGAACTGG CCGGGCTGGA GGTGCCGCAG GACTGGACCG CCCATGCCCG CGCGCTGTTC
GGATTGCCGG ATGAGCCGCT GGTGCTGCAC GACCGGACGC GCGGGCAGGT GCGGCTGGCC
TTTTTGCGCG ATGGCCGGCT GCAGGCGGCG CTGTTCGTCG CGCCGGGGCC GGTGGGCCTG
TCGCGCAGCC ATGTCGCAGC GCTGCTGGGC GAGGGCGGGG CCGAGGCGCT GGCCGGCCGC
CCCGGCGCCG ACCGCCCGGA CGAAGGCGCG CTGGTCTGCG CCTGCTTCGG CATCGGCGTG
AACAGCATCG TGCAGGCCAT CGCCACCCGG CGCCTGACCT CGGTCGAGGC GGTGGGGCAG
GCGTTGCGGG CGGGCACCAA TTGCGGCTCG TGCCGCCCCG AGATCCGCGC GCTGCTGGAG
GCCGGCACCG CCTGCCGCGC GGCGGCCGAG TAG
 
Protein sequence
MQTIRTTCPY CGVGCGVLAT PDGKGGLGIA GDPDHPANRG RLCVKGSALG ETVGHGGRLL 
APRIHGREAG WDEALDLVAH RFRDTIAEHG PDSVGFYVSG QLLTEDYYVA NKLMKGFIGS
ANIDTNSRLC MASAVAGHRR AFGTDTVPGL YEDLELADTV VLVGSNLAWC HPVLYQRLAA
AREARGTRVV VVDPRRAASC DIADLHLALA PGADAALFNL LLAEIARRGL AGGDAAAHLD
GFDEALAAAR GTLPSATGLA HSQLRQFFDL WCGSDKVVTV WSQGVNQSDS GTDKVNAILN
CHLASGRIGR PGMGPFSVTG QPNAMGGREV GGLANMLACH LEIENPAHRE AVRGFWNAPR
MAERPGLKAV DMFRAVEDGR IKALWIICTN PAATMPEADR VARAIAGCDF VAVSDIMART
DTTRLAHVLL PATGWGEKDG TVTNSERRIS RQRRTLAPAG QARDDWRILA EVGCRMGWAD
AFGWTSPAQV FAEHAALSGI AGGLGSDFDI SAHAGITAAE YDALGPFLWP QSAGRQGGRF
FGDGRFHTPS GRARMVAVTP RPPQPVDADH PFRLNTGRVR DHWHTMTRTG LSPRLSRHLA
EPFLELHPSD AARLDLTPAS LAEVCGPHGR AVLRVLVTDR VAPGHPFAPM HWTGETAPSG
RIDALVPGTV DPVSGQPALK SATVAIRPFA ARWFGFAVSA GAIRPDCDYW ARATLPRGEQ
AELAGLEVPQ DWTAHARALF GLPDEPLVLH DRTRGQVRLA FLRDGRLQAA LFVAPGPVGL
SRSHVAALLG EGGAEALAGR PGADRPDEGA LVCACFGIGV NSIVQAIATR RLTSVEAVGQ
ALRAGTNCGS CRPEIRALLE AGTACRAAAE