Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4447 |
Symbol | |
ID | 4582997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1655608 |
End bp | 1656621 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639771754 |
Product | extracellular solute-binding protein |
Protein accession | YP_918207 |
Protein GI | 119387152 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.181234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCTCG GACTATCTGG ACTGATCGGT GCCGTGCTTG CTGCGCAGGC GGTTGCCGCA AGCGCCCAGG AACTGAACCT TTACACCACG CGCGAGCCGA ATCTGATCGA GCCGCTGCTG GCCTCGTTCA CCGAAACGAC CGGGGTGAAG GTCAATACCA TCTTCCTCAA GGACGGCCTG CCCGAGCGGG TCGAGCAGGA GGGCGAGGCC TCGCCCGCCG ACGTGCTGAT GACCGTGGAC ATCGGCAACC TGGTCGATCT GGTCGATCGC GGCCTGACCC AGCCCGTCGA ATCCGAGGCG CTTTCCGCCG CCATCCCCGA GAACCTGCGC GACAAGGACG GCAACTGGTT CGCGCTGTCG CAGCGGGCGC GGGTGCTTTA CGCCGAGAAG GACCTGGATC TTGCGAGCTT TACCTATGAA GACCTCGCCA AGCCGGAATG GAAGGGCAAG GTCTGCATCC GCTCGGGGCA GCATCCCTAC AACGTGGCGC TGACCGCCTC CTACATCGTG CATCACGGCG AAGAGGCCGC CAAGACCTGG CTGGAGGGCG TCAAGGCGAA CCTGGCCCGC ACCGCCGGCG GCGGCGACCG CGACGTGGCC CGCGACATCA TGGGCGGCAT CTGCGAGATC GGCATCGCCA ATTCCTACTA TGTCGGCCTG ATGCGCAGCG GCGCCGGCGG TCCCGAACAG GAGGAGTGGG TCAAGGCGAT CAAGGTCGTC CTGCCCACCT TCGAGGATGG CGGCACGCAG GTGAACGTCT CGGGCGCGGC GGTGGCCAAG AATGCCCCGA ACCGCGACCA GGCGGTGCAA CTGCTGGAAT ACCTGGTCTC GGACGAGGCG CAAAAGATCT ATGCCGAGGC GAATTTCGAA TATCCGGTCA AGCCCGGCGT CGCGGTCAGC CCGGTGATCG AGGATATTGC CGATCTCAAG GTGGACGGCA CCGACCTGAC CGAGATCGCC CGCCAGCGCA AGGCGGCGAG CGAACTGGCC GAGGCGGTGG GCTTCGACAA CTGA
|
Protein sequence | MRLGLSGLIG AVLAAQAVAA SAQELNLYTT REPNLIEPLL ASFTETTGVK VNTIFLKDGL PERVEQEGEA SPADVLMTVD IGNLVDLVDR GLTQPVESEA LSAAIPENLR DKDGNWFALS QRARVLYAEK DLDLASFTYE DLAKPEWKGK VCIRSGQHPY NVALTASYIV HHGEEAAKTW LEGVKANLAR TAGGGDRDVA RDIMGGICEI GIANSYYVGL MRSGAGGPEQ EEWVKAIKVV LPTFEDGGTQ VNVSGAAVAK NAPNRDQAVQ LLEYLVSDEA QKIYAEANFE YPVKPGVAVS PVIEDIADLK VDGTDLTEIA RQRKAASELA EAVGFDN
|
| |