Gene Pden_4433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4433 
Symbol 
ID4582983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1641493 
End bp1642257 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID639771740 
Productregulatory proteins, IclR 
Protein accessionYP_918193 
Protein GI119387138 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.343959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGT ATCAAGACAG TTCCCAGGCG CCCCCAAGCC TGCGCAATCT CCAGATCCTG 
GAAGTGCTGG CGCGCGAGGC GCGGCCGATG ACCGCCACCG AGATCAACGC CAGCCTCGGC
CTGCCCAAGC CGACCATCCA CCGCCTGGTC GCCACCCTGG AACAAGAGGG CTACCTGTCG
CGGCAACTCG ATGGGCGCAG CTATCTGCCC GGCCTCAAGC TGCGGCGCAT GATGCTGGGC
GTCATGCATG CCGGCCAATA CGACCTGGCG CGCCACGACG TGCTGGTCCG GCTGTTCGCC
TCGGTGGGCG AAACCTGCTC GATCTCGATC CCCGAGGGCG ACACGCTGGT CTATGTGGAC
CGGGTCGAGA CGAACTGGCC CTTGCGGCTG GTGATCCGGC TGGGCACCCG CGTGCCGCTG
CATGCGACCG CCGCCGGCAA GGTCTGCCTG GCCTTCATGA ACCCGCAGAG CGTCGAGCAT
TTCCTGCGCC ACGCCCAACT GCATCCGCAT ACGCCGAACA CCTTCGCCAG CGCCGAAAGC
CTGCGCGAAG AACTGGCGCG CGTGCGCGAA CAGGGCCACG CCATCGACGA TCAGGAATTC
ATTCCCGGCA TGGTCGGCAT CTCGGTCCCG GCGCTGGATT CGCGCGGCCG GGTGCTGGCC
GCCGTGACCT TTCACGCGCC CGTCCAGCGC ATGTCGCTGG ACACGGCCAT GACGCATCTG
CCGGCGCTGC AACGCGCCGC ACGCGAGCTG GCCGACCTGG CCTGA
 
Protein sequence
MQEYQDSSQA PPSLRNLQIL EVLAREARPM TATEINASLG LPKPTIHRLV ATLEQEGYLS 
RQLDGRSYLP GLKLRRMMLG VMHAGQYDLA RHDVLVRLFA SVGETCSISI PEGDTLVYVD
RVETNWPLRL VIRLGTRVPL HATAAGKVCL AFMNPQSVEH FLRHAQLHPH TPNTFASAES
LREELARVRE QGHAIDDQEF IPGMVGISVP ALDSRGRVLA AVTFHAPVQR MSLDTAMTHL
PALQRAAREL ADLA