Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4433 |
Symbol | |
ID | 4582983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1641493 |
End bp | 1642257 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771740 |
Product | regulatory proteins, IclR |
Protein accession | YP_918193 |
Protein GI | 119387138 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.343959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGT ATCAAGACAG TTCCCAGGCG CCCCCAAGCC TGCGCAATCT CCAGATCCTG GAAGTGCTGG CGCGCGAGGC GCGGCCGATG ACCGCCACCG AGATCAACGC CAGCCTCGGC CTGCCCAAGC CGACCATCCA CCGCCTGGTC GCCACCCTGG AACAAGAGGG CTACCTGTCG CGGCAACTCG ATGGGCGCAG CTATCTGCCC GGCCTCAAGC TGCGGCGCAT GATGCTGGGC GTCATGCATG CCGGCCAATA CGACCTGGCG CGCCACGACG TGCTGGTCCG GCTGTTCGCC TCGGTGGGCG AAACCTGCTC GATCTCGATC CCCGAGGGCG ACACGCTGGT CTATGTGGAC CGGGTCGAGA CGAACTGGCC CTTGCGGCTG GTGATCCGGC TGGGCACCCG CGTGCCGCTG CATGCGACCG CCGCCGGCAA GGTCTGCCTG GCCTTCATGA ACCCGCAGAG CGTCGAGCAT TTCCTGCGCC ACGCCCAACT GCATCCGCAT ACGCCGAACA CCTTCGCCAG CGCCGAAAGC CTGCGCGAAG AACTGGCGCG CGTGCGCGAA CAGGGCCACG CCATCGACGA TCAGGAATTC ATTCCCGGCA TGGTCGGCAT CTCGGTCCCG GCGCTGGATT CGCGCGGCCG GGTGCTGGCC GCCGTGACCT TTCACGCGCC CGTCCAGCGC ATGTCGCTGG ACACGGCCAT GACGCATCTG CCGGCGCTGC AACGCGCCGC ACGCGAGCTG GCCGACCTGG CCTGA
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Protein sequence | MQEYQDSSQA PPSLRNLQIL EVLAREARPM TATEINASLG LPKPTIHRLV ATLEQEGYLS RQLDGRSYLP GLKLRRMMLG VMHAGQYDLA RHDVLVRLFA SVGETCSISI PEGDTLVYVD RVETNWPLRL VIRLGTRVPL HATAAGKVCL AFMNPQSVEH FLRHAQLHPH TPNTFASAES LREELARVRE QGHAIDDQEF IPGMVGISVP ALDSRGRVLA AVTFHAPVQR MSLDTAMTHL PALQRAAREL ADLA
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