| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4377 |
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| Symbol | |
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| ID | 4582927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1567308 |
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| End bp | 1569434 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639771684 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_918137 |
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| Protein GI | 119387082 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.692783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.664042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG ATGGCGTAAA GGCCGAGCTG GACTATCACG CGCTGAATGC GATGCTGAAC
CTTTACGACG GCGAGGGCCG CATCCGCTTC GACGCGGATC GCAAGGCCGC GCGGCAGTAT
TTCCTGCAGC ATGTCAACCA GAACACCGTC TTCTTCCACT CGCTGGACGA AAAGCTGGGC
TATCTGGTCG ACGAGGGCTA TTACGAGGCC GAGGTGCTGG ACCAGTATCC GCGCGCCTTC
CTGCACCGGA TCTGGGACGC GGCCTATGCG CGGAAATTCC GCTTTCCGAC CTTTCTCGGC
GCCTTCAAGT ATTACACCAG CTATACGCTG AAGACCCGCG ACGGGCGGCG CTATCTGGAA
CGCTACGAGG ACCGGGTGGT CATGGTCGCG CTGGCGCTCG CGCGCGGCGA CGAGGATCTG
GCCATGCGCT TCATGGAGGA AATCCTGTCG GGCCGGTTCC AGCCCGCCAC GCCGACCTTC
CTGAACGCCG GCAAGAAGTC GCGGGGCGAG CTGATCTCGT GCTTCCTGCT GCGGCTGGAA
GACAACATGG AATCCATCGG CCGCGGCATC AATTCGGCGC TGCAGCTTTC CAAGCGCGGC
GGCGGCGTCG CCCTGATGCT GACCAACCTG CGCGAGGCCG GCGCGCCGAT CAAGGGGATC
GAGAACCAGT CCTCGGGCGT CATCCCGGTG ATGAAACTGC TGGAGGACAG CTTTTCCTAT
GCCAACCAGC TTGGCGCGCG GCAAGGCGCG GGGGCGGTCT ATCTGAACGC GCATCACCCC
GACATCCTGC GCTTCCTGGA CACCAAGCGC GAGAACGCCG ACGAAAAGAT CCGCATCAAG
ACGCTGTCGC TGGGCGTGGT GATCCCGGAC GTGACCTTCG AACTCGCCAA GCGCAACGAG
GACATGTACC TGTTCTCGCC CCATGACGTG GAAAAGGTCT ATGGCCTGCC CTTCTCGGAA
ATCTCGGTCA CCGAGAAATA TGCCGAGATG GTGGACGACA AGCGCATCCG CAAGAAAAAG
ATCAACGCCC GCGCCTTCTT CCAGACGCTG GCCGAGATCC AGTTCGAAAG CGGCTATCCC
TACATCATGT TCGAGGACAC GGTGAACCGC GCCAACCCGG TCGCCGGCCG CATCAGCATG
TCGAACCTGT GCAGCGAGAT CCTGCAGGTG AACGAGGCCA GTGAGTTCGA CGAGGATCTG
GGCTATCGCC ACCTCGGCAC GGATATTTCC TGCAACCTCG GCTCGCTCAA CATCGCCGCG
ACCATGGACG GGCCGGATTT CGGCGCGACC GTCGAGGCGG CGATCCGGGC GCTGACCGCG
GTGTCGGAGA TGTCGGCCAT CGAGGCCGTG CCCTCGATCC GGCGCGGCAA TGACGAGGCC
CATGCCGTGG GGCTGGGCCA GATGAACCTG CACGGATTCC TGGCGCGCGA GCGCATCCAT
TACGGCAGCC CCGAGGGCGT CGAGTTCACC TCGGTCTATT TCGCCGCCGT GGCCTATCAC
GCCATCCGCG CCTCGAACCT GCTGGCGCAG GAAAAGGGCC GGACCTTCAA GGATTTCGAC
AAGTCGAAAT ATGCCGACGG CTCGTTCTTC GACAAATACG TCGCGCAGGA CTGGCTGCCC
ACGCTGCCCG ATGTCGCGCG GGTGTTCGAG GGCGTCAGCC TGCCCACCCG CGAGGATTGG
GCGGCACTGC GGGAATCGGT GATGCGGCAC GGGCTTTACA ACCGCAACCT GCAGGCGGTG
CCGCCCACCG GCTCGATCAG CTATATCAAC AACTCGACCA GCTCGATCCA TCCGATCGTG
GCCAAGATCG AGATCCGCAA GGAAGGCAAG ATCGGCCGGG TCTATTACCC CGCCGCCTTC
ATGTCCAACG AGAACCTGGA CTATTACCGC GACGCATACG AGATCGGACC CGAGGCGATC
ATCGACACCT ATGCCGCCGC GACCGAGCAT GTCGACCAGG GGTTGTCGCT GACGCTGTTC
TTCCCGGCCG AGGCCACGAC GCGCGACATC AACCGCGCCC AGATCTACGC CTGGAAGAAG
GGCATCAAGA CGATCTATTA CATCCGGCTG CGCCAGACCG CGCTGGAAGG CACCGAGGTG
CAGGGCTGCG TTTCCTGCAC GCTTTGA
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| Protein sequence | MLDDGVKAEL DYHALNAMLN LYDGEGRIRF DADRKAARQY FLQHVNQNTV FFHSLDEKLG
YLVDEGYYEA EVLDQYPRAF LHRIWDAAYA RKFRFPTFLG AFKYYTSYTL KTRDGRRYLE
RYEDRVVMVA LALARGDEDL AMRFMEEILS GRFQPATPTF LNAGKKSRGE LISCFLLRLE
DNMESIGRGI NSALQLSKRG GGVALMLTNL REAGAPIKGI ENQSSGVIPV MKLLEDSFSY
ANQLGARQGA GAVYLNAHHP DILRFLDTKR ENADEKIRIK TLSLGVVIPD VTFELAKRNE
DMYLFSPHDV EKVYGLPFSE ISVTEKYAEM VDDKRIRKKK INARAFFQTL AEIQFESGYP
YIMFEDTVNR ANPVAGRISM SNLCSEILQV NEASEFDEDL GYRHLGTDIS CNLGSLNIAA
TMDGPDFGAT VEAAIRALTA VSEMSAIEAV PSIRRGNDEA HAVGLGQMNL HGFLARERIH
YGSPEGVEFT SVYFAAVAYH AIRASNLLAQ EKGRTFKDFD KSKYADGSFF DKYVAQDWLP
TLPDVARVFE GVSLPTREDW AALRESVMRH GLYNRNLQAV PPTGSISYIN NSTSSIHPIV
AKIEIRKEGK IGRVYYPAAF MSNENLDYYR DAYEIGPEAI IDTYAAATEH VDQGLSLTLF
FPAEATTRDI NRAQIYAWKK GIKTIYYIRL RQTALEGTEV QGCVSCTL
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