Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4349 |
Symbol | |
ID | 4582899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1535156 |
End bp | 1535776 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639771656 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_918109 |
Protein GI | 119387054 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.20794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.534464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGCAG AGCGCATCAT CCTTGCGGAC GACCACCCGG TCTTTCGGGA CGGGTTGCGG CGCATCGTCG CCCGGCTGGT GCCGGGGGCC GACCTGTTCG AGGCCGCCAG CTTTGCCGAG GTCGACGCGC TGGCCAAGGT GGGCGGGGCG CCCGCGGCCT TTCTGCTGGA CCTGCTGTTT CCCGGCTTCG ACCCCGAGCA CGGCATCGCC GCCCTGCGCC GCGATTATCC GCGCGCGACG ATCATCGTGA TCTCGATGGT CGATGACGAC CGCACCGTGG CCCGCGTCAT GCAGGCCGGC GCCGACGGCT TCATCGGCAA GGCCGTCACC CCCGAGGAGG TGGCCCGGGC CATCCGACTG ATCCGCGAGG GCGAGGTGGT GATCCGCCAG AGCAGTGGCG GCCCGCTGCC CGCTGCGCCC GACGACCGCA TCGAGGCGCT GAGCCCGCGG CAAAAGGAGG TGCTGCGGCT GATCGCACGC GGCGCCTCGA ACAAGGAGAT CGCGCGCGAA CTGGAGATTT CGCCCTTCAC GGTGCGCATC CATGTCTCGG CCATCCTGCG GGTGCTGGAG GTGCCGACCC GCGCGGCCGC GGCGGCGCGG GCAGGGCAGG GCGCGCTTTA G
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Protein sequence | MTAERIILAD DHPVFRDGLR RIVARLVPGA DLFEAASFAE VDALAKVGGA PAAFLLDLLF PGFDPEHGIA ALRRDYPRAT IIVISMVDDD RTVARVMQAG ADGFIGKAVT PEEVARAIRL IREGEVVIRQ SSGGPLPAAP DDRIEALSPR QKEVLRLIAR GASNKEIARE LEISPFTVRI HVSAILRVLE VPTRAAAAAR AGQGAL
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