| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4303 |
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| Symbol | rpsD |
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| ID | 4582853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1483465 |
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| End bp | 1484085 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771610 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_918063 |
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| Protein GI | 119387008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAC GCACCGCTGC CAAGTACAAG ATCGACCGCC GCATGGGCGA AAACATCTGG
GGCCGCGCCA AGTCGCCGCT CAACCGCCGC GAATACGGCC CCGGCCAGCA CGGCCAGCGC
CGCAAGGGCA AGCTGTCGGA TTTCGGCACC CAGCTGCGCG CCAAGCAGAA GCTGAAAGGC
TATTACGGCG ACCTGACCGA GAAGCAGTTC CGTCGCATCT ATGCCGAGGC CGAGCGCGTC
AAGGGCGACA CCGGCGAGAA CCTGATCGGC CTCCTGGAGC GCCGCCTGGA CGCCGTGATC
TATCGCGCCA AGTTCGTGCC GACCATCTTC GCCGCCCGCC AGTTCGTGAA CCACGGCCAT
GTCGAGGTGA ACGGCAAGCG CGTGAACATC GCCTCGTATC GCGTCAAGGA AGGCGACGTG
GTCTCGATCC GCGAGCGGTC GCGCCAACTG GCCATCGTGC TGGAATCGGT GGGCCTGGCC
GAGCGTGACG TGCCGGACTA CCTGGAAGTG GACCACAACA AGATGACCGC GACCTTCGTG
CGCACTCCGG CCCTGGGCGA CGTGCCCTAT GCCGTGCAGA TGGAGCCGAA CCTGGTCGTC
GAATTCTACG CGAAGAACTG A
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| Protein sequence | MTKRTAAKYK IDRRMGENIW GRAKSPLNRR EYGPGQHGQR RKGKLSDFGT QLRAKQKLKG
YYGDLTEKQF RRIYAEAERV KGDTGENLIG LLERRLDAVI YRAKFVPTIF AARQFVNHGH
VEVNGKRVNI ASYRVKEGDV VSIRERSRQL AIVLESVGLA ERDVPDYLEV DHNKMTATFV
RTPALGDVPY AVQMEPNLVV EFYAKN
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