Gene Pden_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4270 
Symbol 
ID4582820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1441147 
End bp1442124 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID639771577 
Productinner-membrane translocator 
Protein accessionYP_918030 
Protein GI119386975 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACCCGCTCGA CAAACCCTAT GCACAGCTGG CGCTGGCGGT GCTGGCCGTG 
CTGGTGCTGC CGCTGTTCCT GAAATCCGGC ATCCTCGCGA CCGAAATCCT GATCTTTGCC
ATGGTCGTCG CCGCCTGCAA CCTGCTTCTG GGCTATACCG GCCTGCTGTC CTTCGGCCAG
GGCATCTTCT TCGGCATCGG CACCTATGCG GCGGGCATCT GCCTGACGCG CTGGCAGATC
CCGGTGCCGG TGGTGCTGGC CAGCGCGGCG GTGCTTGGCG CGGCCACGGC GACGCTGGTC
GGCTGGCTGT CGATCCGCCG GCAGGGGGTC TATTTCGTCA TGCTGACGCT GGCCTTTTCA
CAGCTGTTCT ATTTCGTCGC CTATACGTTC AGCGGCGTGA CCGGCGGCGA CAACGGCCTG
TTGGGCGTGC CGCGTCCCTC GGTCGGCGGC ACGGCGCTGA ATGCGCCCTG GTCCTATTAC
ACCTATGTCG CGGTCTGTTT CGTGGCGGTC TTCGCGATCC TGGTCATGGT CACGCAATCG
ACCTTTGGCC GCACCCTGCT GGCGATCCGC GAGAACGAGG GGCGCGCGGC CGCCATCGGC
TTTCCCACCA AGCTGTTCAA GCTTGAGGCC TTCGCCATCT CGGGCGCGGT CACGGCCTTC
GGCGGCGCGC TCCATGCCAT GCTGATCGGC GTCGCGCCCT TGTCGAACAT CGAATACCAC
ACCAGCGAGC TGATCCTGAT CATGACCATC ATCGGCGGCA GCTCCAGCCT GTTCGGCTCG
GTGCTGGGGG CGGGGTTCTA CCTGCTTCTG GCCGATGCGC TTTCGACCGT CTGGCCGCGC
TGGCTGTTGC TGCTGGGCCT GGTGCTGGTC ACCGTGGCGC TGTTTCTGCA ACGCGGGCTC
TGGGGGCTGG TCGAGCGGGG CTACGACCTG GTCTTCCGCC GCGAACGGGC GCCCGAAACC
CCGGCCGAGG AGCATTGA
 
Protein sequence
MSMNPLDKPY AQLALAVLAV LVLPLFLKSG ILATEILIFA MVVAACNLLL GYTGLLSFGQ 
GIFFGIGTYA AGICLTRWQI PVPVVLASAA VLGAATATLV GWLSIRRQGV YFVMLTLAFS
QLFYFVAYTF SGVTGGDNGL LGVPRPSVGG TALNAPWSYY TYVAVCFVAV FAILVMVTQS
TFGRTLLAIR ENEGRAAAIG FPTKLFKLEA FAISGAVTAF GGALHAMLIG VAPLSNIEYH
TSELILIMTI IGGSSSLFGS VLGAGFYLLL ADALSTVWPR WLLLLGLVLV TVALFLQRGL
WGLVERGYDL VFRRERAPET PAEEH