Gene Pden_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4195 
Symbol 
ID4582745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1352237 
End bp1353016 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID639771502 
Productnitroreductase 
Protein accessionYP_917955 
Protein GI119386900 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CCGTCCACGA CCCTACCGCC CTGTCTCGCC TGTTTCACCT GAATTCCGAG 
CCCTGGCTGA ACGAGGCAGC CTATCGCGCC GGTCCCTATC TGCAGGATTT CCGCAGCTAT
CCGCAGGCGC CGCGCGTGGT CTTGCCCGCA ACCGACCCGG GCGCGGTCGA GGCGCTGGCG
ATGGGGCGCC GCTCGACCCG CGCCTTCCTG CCCGAGCCGT TGCCGCTTGC AGCCCTGGCG
CGGCTGATGC GCGCCGGATA CGGGCTGACC GGCCCCGAGC CATTCGAGAC CGGCGGCCGG
TTCCTGCGCC GCAGCGTGCC CTCGGCCGGC GGCACCTATC CGCTGGAGAT CTATGCGCTG
GTGGCGCGGG TCGAGGGGCT GGCGCCCGGC ATCCATCACT ACGACGCCCA GGGCGATGCG
ATGGAACTGC TGCGCCCCGG CCCCTGGCAG GCCGAGGCCG AGCCGATGTT CTACACCTGG
CCCTTCGTGG CCGAGGCGCC GGTCATCCTG TGCCTGGCCG CGATCTTTTC GCGCACGCAG
AAGAAATACG GGCCGCGCGG CTATCGCTAT GTGCTGCTCG AGGCAGGGCA TGCCGCGCAG
AACCTTTGCC TTGCGGCGGC CGAGCAGGGG TTGGCGAGCC TGTGCATGGG CGGGTTCCGC
GACAGCCGGC TGAACGCGCT GATCGGGCTT TCCCAGCCCG GGGAGGGCGT GGTCTACACC
CTGGCCTTCG GCCGCCCCGT CGCCCCGGGC GAGGCGCAGC CCGGCAGTTC GGCCGGGTAG
 
Protein sequence
MSIPVHDPTA LSRLFHLNSE PWLNEAAYRA GPYLQDFRSY PQAPRVVLPA TDPGAVEALA 
MGRRSTRAFL PEPLPLAALA RLMRAGYGLT GPEPFETGGR FLRRSVPSAG GTYPLEIYAL
VARVEGLAPG IHHYDAQGDA MELLRPGPWQ AEAEPMFYTW PFVAEAPVIL CLAAIFSRTQ
KKYGPRGYRY VLLEAGHAAQ NLCLAAAEQG LASLCMGGFR DSRLNALIGL SQPGEGVVYT
LAFGRPVAPG EAQPGSSAG