Gene Pden_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4159 
Symbol 
ID4582709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1315907 
End bp1316818 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID639771466 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_917919 
Protein GI119386864 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.274128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.812615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGA ACCGCCGCCA TTTCCTTGCC GCTTCCGCCG CCGCCCTGGT CCTGCCCGGC 
AGGCGGGTCT GGGCCGCCAG CACCCTGACC ATGGGAACGG TGCGCGTCGA CAGCCTGTCG
GACGGGCATC TGGAACTGCC GCTGGACTTT ACCTTCGCCG GCCTGCCCGA GGCCGAGATC
GCGGCCCTGC TCGACCGGCA CGGGCTGGCG GCGGACGGGC TGACGCCGCC CTGCAACCTG
ACGCTGCTGC GCGACGGCAC GAACACCGTG CTGTTCGACC TGGGCGCGGG GCCGGATTTC
ATGCCCACTG CCGGCAAGCT GGCCGAGGCG CTGGAGGCGC TGGACCTGAC GCCCGGGGAT
GTGACGCATG TGCTGATCAC CCACGGCCAT CCCGATCACC TCTGGGGCCT GCTGGACGAA
TTCGACGAGC CGGTCTTCGC CGATGCCGAA TACATGATCG GCCAGGCCGA GTTCAACTAT
TGGATGGACC CGGCCACGGT CGAAAGCATC GGCGAGGACC GCGCCAGCTT CGCCATCGGC
GCCTCGCGGC GGCTGGAGGT CGTCGCGGAC AGCATCCGCA AGCTGGCCGA CGGCGAAGAA
GCCCTGCCCG GCATCACCGC GCGGCTGACG CCCGGCCATA CCCCCGGCCA CCTGGCCTAT
GAGATCGCCA CGCCCGAGGG CACGCTGATG GTCGTGGGCG ACGCGATCGG CAACCACCAC
GTCGCCTTCG ACCGCCCCGA CTGGCCCGCG CCCTCGGACC AGGATCCCGC GCTGGCCGCC
GCCACCCGCG TCGCGCTGCT GGAGCGGCTG GCGGACGGGG CCATGCCCTT CATCGGCTAC
CACCTGCCGC AGGGCGGGCT GGGACGGGTG GAAAGAACCG AAACCGGCTA TCGCTTCGCG
GGGGACATCT GA
 
Protein sequence
MHLNRRHFLA ASAAALVLPG RRVWAASTLT MGTVRVDSLS DGHLELPLDF TFAGLPEAEI 
AALLDRHGLA ADGLTPPCNL TLLRDGTNTV LFDLGAGPDF MPTAGKLAEA LEALDLTPGD
VTHVLITHGH PDHLWGLLDE FDEPVFADAE YMIGQAEFNY WMDPATVESI GEDRASFAIG
ASRRLEVVAD SIRKLADGEE ALPGITARLT PGHTPGHLAY EIATPEGTLM VVGDAIGNHH
VAFDRPDWPA PSDQDPALAA ATRVALLERL ADGAMPFIGY HLPQGGLGRV ERTETGYRFA
GDI