Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4132 |
Symbol | |
ID | 4582682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1288663 |
End bp | 1290045 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771439 |
Product | L-serine dehydratase 1 |
Protein accession | YP_917892 |
Protein GI | 119386837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.465086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.630404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTTT CCGTCTTCGA CATCTTCAAG ATCGGAGTCG GCCCGTCCTC GTCCCATACC ATGGGGCCGA TGGTGGCCGC AGGCCGCTTT CTGGACGCGC TGCGCGAACA GCCCTTTCGC GCGCACGGGC TGCGCGCCAG CCTGCACGGC AGCCTGGCCT TCACCGGCAA GGGCCACGCC ACCGACCGCG CCACCATCCT TGGCCTGGCC GGATTCCTGC CCGAAACCAT GGATGCCGAG GCGGCCGAGG CCGTGCTGGA GAAAAACCGC GAGACGAAGA TCCTGTCGCC GCGCGACCTG GGCGATCTGG CCTTCGACCC GATGCGCGAC CTGATCTTCG ACTACGACCA CGCCCTGCCC GGCCATGCCA ACGGCATGGT CCTGATGGCG ACCGACGCCC AGGGCGACGT GATCTTTCGC GAGGTCTATT ACTCGATCGG CGGCGGCTTC GTGCTGACCG AGGGCGAGTT GGCGGCGCGC GGCGACGACA CCCGCTCGGA TGCCTCGCCC AAGGTGCCCT TCCCCTTCGC CTCGGCGGCC GAGATGCTGG AGATGGCCGA AAGATCGGGC AAGTCCATCG CCCAGATGAA ACGCGAGAAC GAGCGGGTCT TTCGCAGCGA TGCCGAGATT TCAGCCGGCA TCCGCCGCAT CTGGCAGGTG ATGCGCGACT GCATGGACCG GGGGCTTGCG ACCGGCGGCA TACTGCCCGG CGGGCTGTCG ATCCGCCGCC GCGCCGCCGG CATCCACGAG GCGCTGAAGG CCGAGGCCGG CATGAACCTG ACCGCGCCGC ATGTCATCAA CGACTGGATG TCGATCTATG CCATGGCCGT GAACGAGGAG AACGCGGCCG GCGGCCAGGT CGTGACCGCG CCGACGAACG GCGCGGCGGG CGTGGTGCCG GCGGTGATCC GCTATTGGCT GGACCATGTG CCGGGCGCGT CCGAGCGCCA GCTCGACGAG TTCCTGCTGA CCGCCGCGGC CATCGGCGGG CTGATCAAGC ACAACGCCTC GATCTCGGGC GCGGAATGCG GCTGCCAGGC CGAGGTCGGC TCGGCCAGCG CCATGGCGGC GGCAGGGATC TGCGCCGCGA TGGGCGGCAC CGTCACCCAG GTCGAGAACG CCGCCGAGAT CGCGCTGGAG CATCACCTGG GCATGACCTG CGACCCGGTA AAGGGACTGG TGCAGGTGCC CTGCATCGAA AGGAACGGCC TTGGCGCCAT CAAGGCGGTC TCGGCCGCCA GCCTGGCGCT GCGCGGCGAC GGCCAGCATT TCGTGCCGCT GGACGCCGCC ATCGAGACCA TGCGCCAGAC CGGCCGCGAC ATGAGCGACA AATACAAGGA GACCTCGCTG GGCGGTCTGG CCGTCAACGT GCCCAACTGC TGA
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Protein sequence | MFLSVFDIFK IGVGPSSSHT MGPMVAAGRF LDALREQPFR AHGLRASLHG SLAFTGKGHA TDRATILGLA GFLPETMDAE AAEAVLEKNR ETKILSPRDL GDLAFDPMRD LIFDYDHALP GHANGMVLMA TDAQGDVIFR EVYYSIGGGF VLTEGELAAR GDDTRSDASP KVPFPFASAA EMLEMAERSG KSIAQMKREN ERVFRSDAEI SAGIRRIWQV MRDCMDRGLA TGGILPGGLS IRRRAAGIHE ALKAEAGMNL TAPHVINDWM SIYAMAVNEE NAAGGQVVTA PTNGAAGVVP AVIRYWLDHV PGASERQLDE FLLTAAAIGG LIKHNASISG AECGCQAEVG SASAMAAAGI CAAMGGTVTQ VENAAEIALE HHLGMTCDPV KGLVQVPCIE RNGLGAIKAV SAASLALRGD GQHFVPLDAA IETMRQTGRD MSDKYKETSL GGLAVNVPNC
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