Gene Pden_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3975 
Symbol 
ID4582526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1114309 
End bp1114920 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID639771284 
Producthypothetical protein 
Protein accessionYP_917737 
Protein GI119386682 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.620659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG TGACGCAGAT CGCGGCCGAG ATCGTCGCGC GTGAGGGGGG CTACGTCAAC 
GACCCCGACG ACCCGGGCGG GGCGACGAAT TACGGCGTGA CGCTGGCGAC CTTGCAGCGG
CTGGGCATCG ACAAGACCGG CGACGGGCGC GTCGATGTTG CGGATGTCAG GGCGCTGACC
CGCGCCGACG CCGAGCGCAT CTTCGTCGAG CATTACTTTC GCCGGCCGCG CCTGGCGGAA
CTGCCCGCCT CGGTGCAGGC GTCGGTATTC GACATGTATG TCAATGCCGG CAGCAATGCG
GTGAAGATCC TGCAACGGCT GGTGACGCGG ATGGGCTTTG CCGCGGCCGA CGACGGCCTG
GTCGGGCCGC GCACCATCCT GGCGGCGCAG CAGGCCGACG CGGCGGCACC GGGCTATTTC
GCCGACGCCT ACGGGATCGC ACGGCGCAAC TACGATTATT CGCTGGGCGA TGCGCGGCCG
GCCAGCCGCA AATACGCCCG CACGCAATCG GGGGGCAAGG GCGGCTGGAT CCTGCGGGCC
GAGGAGTTCA TCTCGGCCAG ATATCACCTC ACGTTGGCCG AGCACCGGGC AAGGGTGGCG
AAATGGGGCT GA
 
Protein sequence
MKTVTQIAAE IVAREGGYVN DPDDPGGATN YGVTLATLQR LGIDKTGDGR VDVADVRALT 
RADAERIFVE HYFRRPRLAE LPASVQASVF DMYVNAGSNA VKILQRLVTR MGFAAADDGL
VGPRTILAAQ QADAAAPGYF ADAYGIARRN YDYSLGDARP ASRKYARTQS GGKGGWILRA
EEFISARYHL TLAEHRARVA KWG