Gene Pden_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3908 
Symbol 
ID4582459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1043329 
End bp1044126 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID639771217 
Producthypothetical protein 
Protein accessionYP_917670 
Protein GI119386615 
COG category[S] Function unknown 
COG ID[COG3494] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0741095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA TCGCCCTGAT CGCCGGCGAG GGCAGCCTTG CCCCCGCAAT CGCCGCCGCG 
CTGGACCAGC CGCTGGTCTA TGCGCTGGAC AACCTGAAAC CGCAGGTCGA GGCCAAGCCT
TTCCGCCTGG AACGCCTGGT GCCCTTTCTG GACGAGTTGG CCGACCAGGG CGTGACGCAG
GCGGTCTTTG CCGGTGCCAT CCGCCGCCCG AAGATCGAGC CGGAACTTTT CGACGCGCGC
ACCCTGACCA TCGTGCCGCG CATCCTGATG GGGATGCAGT CGGGCGACGA CGCGGCGCTG
CGCGCAGTTC TCGACGTTTT CGAGGAAGCC GGAATATCCA TCTGTTCTGT CGATCAGATC
CTGCCGGAAC TGGTGCCCGG AGAAGGTGTG CTGTCGGGTG AGCCAAGCCA GCGCGACCAG
AAGGACGCCG CCCGCGCCGC CGAGATCGTC GCCGGCCTTG GCGCGCTGGA TATCGGCCAG
GGCGCGGTGG TTGCGCAGGG GCTCTGCCTC GCCGTGGAAG CGCTGCCGGG CACCCAGGCC
ATGCTGGAAT TCGCCAAGCT GCATGCGGGT CTGAAACCCG ACCCCAAGGG AGCGGGCGGC
GTGCTCTACA AGGCGCCGAA ACCCGGCCAG GATCGCCGCA TCGACCTGCC GACCATCGGC
CCCGACACCG TGACCCAGGC TGCCGAGGCC GGGCTGGCCG GCATCGCCTG GGAGGCGGGC
AGCGTCATCC TGCTGGACCG GGCCGAGGCG CTGCGCCGCG CCCAGGCGGC GGGGCTGTTT
CTCTGGGCGC GCGGTTGA
 
Protein sequence
MSRIALIAGE GSLAPAIAAA LDQPLVYALD NLKPQVEAKP FRLERLVPFL DELADQGVTQ 
AVFAGAIRRP KIEPELFDAR TLTIVPRILM GMQSGDDAAL RAVLDVFEEA GISICSVDQI
LPELVPGEGV LSGEPSQRDQ KDAARAAEIV AGLGALDIGQ GAVVAQGLCL AVEALPGTQA
MLEFAKLHAG LKPDPKGAGG VLYKAPKPGQ DRRIDLPTIG PDTVTQAAEA GLAGIAWEAG
SVILLDRAEA LRRAQAAGLF LWARG