| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3841 |
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| Symbol | |
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| ID | 4582392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 975397 |
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| End bp | 977307 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639771150 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_917603 |
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| Protein GI | 119386548 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.092028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA CTCCGACAGC CGTAGCCATT CGATATAATC CCGATCACAC AGGTACTTTC
ACAGTGCCTG ACGACGCGCT GGAAACCCCC ATCTGGTCGC GCCTGAAGCT GGCGATCCGC
ACGAAAAAGC TCGATCACAC CGTTGCGGGC GGCGCTATCA ATCTGTCTTG GCCAGACACT
CTCGGCGTGG TGCGAGAGCT TGGCAGCAAG GCTAACCAGA TAAGCCTAAA TTTCCGCTTC
AGACCCGAGG GTGAGGCCGA AGGCAAGTTG CGCGCGTTCG CTGCGCAGAT ACGCAAGACG
CGCGAGCTAC GCAGTCAGAT CACCGAAGTC CTCACCACGG ATGAGATCGA AGCGCGGCTC
AAGGACATGG GCTTCACCAA GCGTGAGCTC CGCGACTTCC AGCTTCGAGA CCTTTCTCAT
CTGCTTGCAC TCAGCAACGG CGCAAATTTT TCCGTTCCTG GCGCTGGGAA GACCACGGTG
ACATTCGCGC TGCATATGTT GACGCGGCAA CCTGGACATC ACTTCATAGT CGTCGCGCCG
AAGGCGGCCT TCCAGGCCTG GATGGACATT GTTGATGAGT GCATGGTTGA AGATGCCCCA
GACGGCGGCT CTGAACCTTT CACGCTCTTG GTCGGTTCTG AGGATGAAAC CCGCAAAACG
CTTCGGTCGG GGGCGACGCG CTTCATCATG TCCTATGACA TGGTAATCCG TCAGCAAGGG
TTGCTGGCTT CGCACTTCGC CACCACGCCG ACCCATCTTG TACTTGATGA GGCGCACCGC
ATGAAGGCGG GCTGGCAATC TCAGCGCGGC GCTTTCTTTC TTCGAACGGC AGATGACCCT
GTACGGCGCG ATATCCTTAC AGGAACACCA ATGCCGCAGG CGGCATCCGA TATGGAGTCG
CAACTTGATT TTCTGTGGCC TGGACACGGT TACGGCCTAG AAATCTCGCA CGGGAAATCT
CCGCGTGAAG TCCTCGGAAA CCTCTACGTC CGCACGACCA AGACCGAGTT AGGCCTTCCG
CCTGCCGAGC GGCACTTCAT CGATGTCGGC ATGGATTCGG GGCAACTCGC TCTTTACTCC
ATCGTGCGCA ATGAATTCCT GCGCAACTAT TCGAAGCAGA TATCGCGCGG CATGGGTGAC
GCGCAGTTCC TGAAAGCACG GCGTTCGGTC ATGCGCCTGC TTCAGCTTTC CGTCAATCCA
ACCCTTGCGC TCAGCGCTAT GGCCAATGAT GACGTCAAGG TAGACTCGGC CATTGTCGAT
CAGTTGCTCG ACGAAGGCCA CTCCGCGAAG ATGCGGGCTG TCATGGATCA TGCCTATGCA
CTGGCGCGGG ATGGCAAGAA GTGCGTGATC TGGACGATCT TCACCGACAC GATCCACAGC
TTCGTTTCGG CGCTTGCCGA CCTGAATCCC GTCTACATCC ATGGCGGAGT TCCGTCAGGC
CTGCCTAGTG ATCCTGAAAC TAGAGAGGGA CGGATTCGGC GCTTCCACGA AGACCCAGGA
TGCTTCGTAC TCGTGGCAAA TCCAGCCGCA GCGGGTGAGG GCATAAGCCT GCACACCGTC
TGCCACAATG CCATCTACGC CGACCGCAGC TACGTATCGA CCCATTACCT CCAGTCCATC
GACCGCATTC ATCGCCTCGG CTTAGCGCCC GACGAAGAAA CCCACATTCA TATCTATCGC
TCCAAGGCAC CGCCCGTCAT CGGCAGCATC GACATGTCGG TCAGTCGCCG CCTTGTTGAG
AAGATCCGCA ACATGCAGCA GCTCCTTGAC GATCCTGATC TCCACGAGAT CGCCTTTGAC
GAAGAAGAGG CCGCCGATCC GCTCGACTAT GATGTCGAGC TCAAGGATAT AATCGACCTC
ATCGCGGAGA TGGAGGGTAC AGCACCGGAC GTTCCGCCGG AGGTCGAATG A
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| Protein sequence | MSDTPTAVAI RYNPDHTGTF TVPDDALETP IWSRLKLAIR TKKLDHTVAG GAINLSWPDT
LGVVRELGSK ANQISLNFRF RPEGEAEGKL RAFAAQIRKT RELRSQITEV LTTDEIEARL
KDMGFTKREL RDFQLRDLSH LLALSNGANF SVPGAGKTTV TFALHMLTRQ PGHHFIVVAP
KAAFQAWMDI VDECMVEDAP DGGSEPFTLL VGSEDETRKT LRSGATRFIM SYDMVIRQQG
LLASHFATTP THLVLDEAHR MKAGWQSQRG AFFLRTADDP VRRDILTGTP MPQAASDMES
QLDFLWPGHG YGLEISHGKS PREVLGNLYV RTTKTELGLP PAERHFIDVG MDSGQLALYS
IVRNEFLRNY SKQISRGMGD AQFLKARRSV MRLLQLSVNP TLALSAMAND DVKVDSAIVD
QLLDEGHSAK MRAVMDHAYA LARDGKKCVI WTIFTDTIHS FVSALADLNP VYIHGGVPSG
LPSDPETREG RIRRFHEDPG CFVLVANPAA AGEGISLHTV CHNAIYADRS YVSTHYLQSI
DRIHRLGLAP DEETHIHIYR SKAPPVIGSI DMSVSRRLVE KIRNMQQLLD DPDLHEIAFD
EEEAADPLDY DVELKDIIDL IAEMEGTAPD VPPEVE
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