Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3775 |
Symbol | |
ID | 4582326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 912308 |
End bp | 913123 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639771084 |
Product | hypothetical protein |
Protein accession | YP_917537 |
Protein GI | 119386482 |
COG category | [S] Function unknown |
COG ID | [COG3646] Uncharacterized phage-encoded protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000361227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000220505 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATGG AGCAAAGCAC GCCGAAAGGC AACGTCCCTG TCGCCGCCCT CGCCTCGGGC GAGCCGCTGA CCATGAGCAG CCGCGAGATC GCGGAACTGG TCGAAAGCCG CCACGACAAG GTGAAACAGT CGATGGAGAG GCTGTCCGAG CGCGGTATCA TCACTTTTAC CCCAATGGGG GAAAAGTCCT CGGGCGGGCG TCCCGGCACG ATTTACCAAG TAAACAAGCG TGACAGCTTT GTAGTCGTCG CCCAGCTCTG CCCCGAGTTC ACCGCTCGCC TGGTGGACCG CTGGCAGGAG CTGGAACAGG AGAAGGCCAG CGGCGGCTTC GCCCTGCCGC AGACCTACGA GCAGGCACTT GAGGGCTTGC TCGCTAAGGT CCGCGAGAAC GGCGCCTTGC AGATCGAAAA TCGCGCGAAG GACGCGGCCA TCAGCGCCAT GCAGCCGAAG GTGGACGCCT ACGAGGCGTA TCTGTCCGAG GAGGGCGTCT GCCGGATCAC GGATTTCTGC AACAAGCACG GCGTCAAGGT GAACCGTCCC GGCTGGATTC TGCGCGACAG GGGGCTGATG CACCACAAGA AGGTGCTGGC GACCCAGATC GGCCTGAAAT CAGGCATTCT CAAGAACGTG CTGGAAAAGG ACGGCTTCGA ATACATCGAC AGCAAGGGGC AATCGGTAGA GGCGCAGCAA GCCATGATCG TGCGGCAGCG CGAGGTCTCG CTGCTCAAGA TGATCGTGGA CGCCTATGGA CTGACCGCGT TCCGCAACTC TGTCGCGTTC GACCGGGCCA AGGCACTGAT CGGGAGCGGG AAATGA
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Protein sequence | MNMEQSTPKG NVPVAALASG EPLTMSSREI AELVESRHDK VKQSMERLSE RGIITFTPMG EKSSGGRPGT IYQVNKRDSF VVVAQLCPEF TARLVDRWQE LEQEKASGGF ALPQTYEQAL EGLLAKVREN GALQIENRAK DAAISAMQPK VDAYEAYLSE EGVCRITDFC NKHGVKVNRP GWILRDRGLM HHKKVLATQI GLKSGILKNV LEKDGFEYID SKGQSVEAQQ AMIVRQREVS LLKMIVDAYG LTAFRNSVAF DRAKALIGSG K
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