12 homologs were found in PanDaTox collection
for query gene Pden_3775 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008687  Pden_3775  hypothetical protein  100 
 
 		 271 aa  561  1.0000000000000001e-159  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.000000000361227  hitchhiker  0.000220505 
 
 
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NC_007964  Nham_2408  phage-encoded protein-like  38.77 
 
 		 254 aa  136  4e-31  Nitrobacter hamburgensis X14  Bacteria  normal  0.665477  n/a   
 
 
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NC_007964  Nham_3359  phage-encoded protein-like  36.29 
 
 		 259 aa  124  2e-27  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_2913  Roi protein  36.62 
 
 		 240 aa  93.2  4e-18  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00203388  hitchhiker  0.00000000000553867 
 
 
-
 
NC_010465  YPK_1198  putative DNA-binding protein (Roi)  33.04 
 
 		 275 aa  91.7  1e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_011353  ECH74115_3542  DNA-binding protein Roi  35.65 
 
 		 240 aa  90.5  3e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.206304  hitchhiker  0.00000000735314 
 
 
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NC_010658  SbBS512_E1250  hypothetical protein  54.44 
 
 		 235 aa  83.6  0.000000000000004  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.00000878472  n/a   
 
 
-
 
NC_009783  VIBHAR_01961  hypothetical protein  28.85 
 
 		 222 aa  55.1  0.000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003912  CJE1435  DNA-binding protein Roi  22.11 
 
 		 243 aa  50.4  0.00003  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
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NC_009707  JJD26997_0306  DNA-binding protein Roi  25.51 
 
 		 247 aa  45.4  0.0009  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000000394975  n/a   
 
 
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NC_009707  JJD26997_1112  DNA-binding protein Roi  25.51 
 
 		 247 aa  45.4  0.0009  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000052914  n/a   
 
 
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NC_008752  Aave_1690  uncharacterized phage-encoded protein  27.81 
 
 		 236 aa  45.4  0.001  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.0637795 
 
 
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