Gene Pden_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3709 
Symbol 
ID4582261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp857539 
End bp858447 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID639771019 
Producthypothetical protein 
Protein accessionYP_917472 
Protein GI119386417 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.557269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.783471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC AGACACCCAA GGATTGGCTT GAAGCCGAGC TTCAGGACAC GCTCGACGAG 
GATTTCGAGA TCGAGCTGGA GGATGCGATC CTGTCCCAGG AGATCGCCCG CATCTATCGC
CAGACCCATC CCGACCAGAT GCCGCGCGCC GATTATTTCC GCGAGCTGCT GCGGCTTCAG
GCCGAGTTGA TCAAGCTTCA GGACTGGGTG GCCCATCACA AGGAAAAGGT CGTGGTCATC
TTCGAGGGCC GCGACAGCGC CGGCAAGGGC GGTGCGATCA AGCGCATCAC CCAGCGGCTG
AACCCGCGCG TCGCCCGCGT CGTCGCCCTG CCCGCACCCT CGGACCGCGA AAAGACGCAA
TGGTATTTCC AGCGCTACGT CCCGCACCTG CCTGCGGGCG GCGAGATCGT GCTGTTCGAC
CGCAGCTGGT ACAACCGCGC CGGAGTCGAG CGCGTCATGG GCTTCGCGAC CGAGGACCAG
GTCCGGCAAT TCTTCGACGA CGTGCCGGAA TTCGAACGCA TGCTGGTGCG CTCGGGCATC
CGGCTGGTGA AATACTGGTT CTCGATCACC GACGAGGAAC AGCAGATGCG CTTCTTGATG
CGCATCCACG ACCCGCTGAA GCAGTGGAAG CTGTCGCCCA TGGACCTGCA AGCCCGCGTC
CGCTGGGAGG ACTACACCAA GGCCAAGGAA GAGATGTTCG AGCGCACCAA CATCCCCGAG
GCGCCCTGGT ATATCGTGCC CGGCAACGAC AAGAAGCGGG CGCGGCTGAA CTGCATGGCG
CATCTGCTGA CGCAGGTCCC CTACGGGCCG GTCCCGCATG ACGAGATCAC CCTGCCCGAC
CGGGTCTTCA ACCCCGATTA CGAGCGCGAG GTGCTGCCGC CCGAGCTTTA TGTGCCGCAA
CGTTACTGA
 
Protein sequence
MQDQTPKDWL EAELQDTLDE DFEIELEDAI LSQEIARIYR QTHPDQMPRA DYFRELLRLQ 
AELIKLQDWV AHHKEKVVVI FEGRDSAGKG GAIKRITQRL NPRVARVVAL PAPSDREKTQ
WYFQRYVPHL PAGGEIVLFD RSWYNRAGVE RVMGFATEDQ VRQFFDDVPE FERMLVRSGI
RLVKYWFSIT DEEQQMRFLM RIHDPLKQWK LSPMDLQARV RWEDYTKAKE EMFERTNIPE
APWYIVPGND KKRARLNCMA HLLTQVPYGP VPHDEITLPD RVFNPDYERE VLPPELYVPQ
RY