Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3697 |
Symbol | |
ID | 4582249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 846293 |
End bp | 846904 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771007 |
Product | thiamine monophosphate synthase |
Protein accession | YP_917460 |
Protein GI | 119386405 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.431424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACC AGCCCAATTC GCCGCAACTC TACCTGATCA CGCCGGTCGG AGCAGCCGCC TCGACGCTGG GGCCGATGCT GGCCGAGGTC ATGGACCGCT TTCCCGTCGC CTGCCTGCGC ATCCCCGGCG CCGGCACCGA GGACGAGCTG GGCCGCATCG CCGACCTGGC GCGCGAGATC GCCCATGCCC GCGACGTGGC GGTGGTGATC GAGGACCATG TCCAGCTGGC TCAGCGCCAC GGGCTCGACG GCGTGCACCT GACCAACGGC GCGCGTGGCG TGCGCCACGC CCGCAAGGAA CTGGGCCAGG ACGCCATCGT CGGCACCTTC TGCGGCGCCT CGCGCCACGA CGGCATGAAT GCGGCCGAGG CCGGGGCGGA TTACGTCAGC TTCGGCCCCT GCGGCGCCAC CGCGCTCGGC CATGGAGAGA TCGCGCCGCT GGAGCTGTTC CAATGGTGGT CCGAGGTGAT CGAGATTCCC GTCATCGCCG AGGGTGCCCT GACCCCGGCG CTGATCGGCC AACTGGCGCC CGTCGCCGAT TTCATCGCCC TCGGCGCCGA GATCTGGTCG GAACCGGACC CGGCCGAGGC CCTGGGGATT CTCTGGCGCT GA
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Protein sequence | MTDQPNSPQL YLITPVGAAA STLGPMLAEV MDRFPVACLR IPGAGTEDEL GRIADLAREI AHARDVAVVI EDHVQLAQRH GLDGVHLTNG ARGVRHARKE LGQDAIVGTF CGASRHDGMN AAEAGADYVS FGPCGATALG HGEIAPLELF QWWSEVIEIP VIAEGALTPA LIGQLAPVAD FIALGAEIWS EPDPAEALGI LWR
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