| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3547 |
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| Symbol | |
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| ID | 4582102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 694964 |
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| End bp | 696325 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770860 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_917313 |
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| Protein GI | 119386258 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.294103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC ACGACCTGCC CCCCGGCATG ACCCGCGCCG CCGTCGCCAC CGGCACGCAT
CCGGGCTACA TGCCCGGCTT CGGCAACGAT TTCGAGACCG AGGCGCTGCC CGGCGCCCTG
CCGCAGGGCC AGAACAGCCC GCAGAAATGC GAATACGGGC TTTATGCCGA GCAGCTGTCG
GGCACCGCCT TCACCGCGCC GCGCGGCCAG AACGAGCGGA CCTGGTGCTA TCGCATCCGG
CCCTCGGTCC GCCATACCGG CGATTTCGCG GCGATCGATC TGCCGCATTG GAAGACGGCG
CCGAACCTGC GCGACGACAT CGTCAGCCTG GGCCAGTATC GCTGGGACCC GATCCCGGTC
CCGGAGGAGG AGCTGACCTG GATCACCGGC ATGCGCAGCA TGACCACGGC CGGCGACGTG
AACATCCAGG TCGGCATGGC GTCGCATGTC TACCTGGTCA CCCGCTCGAT GCAGGACGAA
TATTTCTTCT CGGCCGACAG CGAGTTGCTG GTGGTCCCGC AAGAGGGCCG GCTGCGCTTC
TGCACCGAGC TGGGGGTGAT CGACCTGGAG CCGCGGGAAA TCGCCATCCT GCCGCGCGGC
CTGGTCTACC GCGTCGAGGT GCTGGAGGGC CCGGCCCGCG GCTTCGTCTG CGAGAATTAC
GGCCAGAAGT TCGACCTGCC GGGCCGCGGC CCGATCGGCG CCAATTGCCT GGCCAATCCG
CGCGACTTCA AATGCCCGGT CGCCGCCTTC GAGGACCGCG AGGCGCGCTC GCGCGTGGTG
ATCAAGTGGT GCGGCCGGTT CCACGAGACC TGGATCGACC ACAGCCCGCT GGACGTGGTG
GCCTGGCACG GGAATTACTG CCCCTACAAA TACGACCTGC GCACCTATTC GCCGGTGGGC
GCGATCCTGT TCGACCATCC CGACCCGTCG ATCTTCACCG TGCTGACCGC GCCCTCGGGC
CAGGAGGGCA CGGCGAATAT CGACTTCGTG CTGTTCCGCG AGCGCTGGAT GGTGGCCGAG
CACAGCTTCC GCCCGCCCTG GTATCACAAG AACATCATGT CCGAGCTGAT GGGCAACATC
TACGGCATCT ACGACGCCAA GCCGCAGGGC TTTGCGCCGG GCGGCATCAG CCTGCACAAT
TGCATGCTGC CGCACGGCCC GGACCGCGAC GCCTTCGAGG GCGCCAGCAA CGCCGATCTG
AAGCCCGAGA AGCTGGAGGA GACCATGAGC TTCATGTTCG AGACCCGCTT TCCCCAGCAC
CTCACCGAAT TCGCTGCGCG CGAGGCCCCG ATGCAGAAGG ACTATATCGA AGTCTGGAAC
CGGCTCGAGA AGAAGTTCGA CGGAACGCCA GGCGTCAAGT GA
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| Protein sequence | MTQHDLPPGM TRAAVATGTH PGYMPGFGND FETEALPGAL PQGQNSPQKC EYGLYAEQLS
GTAFTAPRGQ NERTWCYRIR PSVRHTGDFA AIDLPHWKTA PNLRDDIVSL GQYRWDPIPV
PEEELTWITG MRSMTTAGDV NIQVGMASHV YLVTRSMQDE YFFSADSELL VVPQEGRLRF
CTELGVIDLE PREIAILPRG LVYRVEVLEG PARGFVCENY GQKFDLPGRG PIGANCLANP
RDFKCPVAAF EDREARSRVV IKWCGRFHET WIDHSPLDVV AWHGNYCPYK YDLRTYSPVG
AILFDHPDPS IFTVLTAPSG QEGTANIDFV LFRERWMVAE HSFRPPWYHK NIMSELMGNI
YGIYDAKPQG FAPGGISLHN CMLPHGPDRD AFEGASNADL KPEKLEETMS FMFETRFPQH
LTEFAAREAP MQKDYIEVWN RLEKKFDGTP GVK
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