| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3483 |
|---|
| Symbol | |
|---|
| ID | 4582038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 629588 |
|---|
| End bp | 630667 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770796 |
|---|
| Product | dihydroorotate dehydrogenase |
|---|
| Protein accession | YP_917249 |
|---|
| Protein GI | 119386194 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.825522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.388068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATC TTTCCGTCCA GGTCGGCCGC ACCCGGCTGA AGAACCCCGT CATTGCCGCA
TCGGGCGAGC ACCTGATCGA CGATGCCGGC ATCCTGTCGG CCATCGCCGC CGGGGCAGGG
GCGGTGGTTA TGAAGTCCAG CAACGACTCG GCCGCCGCAC AGCGCCAGTT GCTGCAGGCC
GAATATGCCG CGCTGGATGC GTGCTGGAAC CGTGTCGACT GGGGACCCGG GGCGCCGCGC
GAGGCGACGC TGCTGACGCG CTCGGGGCTG ACGCCGCTTG GCTTCGACGC ATGGCTGGAT
CAGGCGCGGC GGATGGATGC GGCGGCGCGC AAGGCGGATT GCGTCCTGGT CGCCTCGGTG
GTCATGGCCG GGATCGAGGA TGCCGTCCGC CGCGCCCGCG CCGTCGAGGA TGCCGGCCTG
CGCGTCTTCG AGTTCAATAT CGGCACCCCC TATGCCAGCC AGGCGGCCAA GGGTGCGGTC
AGCACCGAGC TTTCGCCGGC GCGCGTGGCG GAACTGGTCG GGCAGGTGAC ATCGGCCGTG
TCGATCCCGG TCTGGGTCAA GCTGTCGGGC CAGAGCGAGC GGGTTCCCGA ACTGGTCGCG
GCCGCCACCG GCGCAGGTGC GGACAGCGCC GTGATCGCCG GGCGGGCGCT GGGACTGGTG
CCCGATCTGG AGACCATGCA GCCGATGCTG GGCACCAGCT GCGGCATCGG CGGCTACTGG
AACCTGCCGC TGACCTGCCA CTGGCTGGCG ATGACCCGCG CTAGGCTGGG CGCGGGGCGG
GCGCTGATCG GCATCAACGG CGCGTGCTCG GGCCGGGATG TCGCACGGAT GATGCTGGCG
GGCGCCTCGG CTGTGGGCCT GTCCTCGGCC GTCATGCTGC GCGGCTGGGA CGTCATCCGC
GATGCCGTCG CCGATCTTGA TGCCTATTGC GCCCAAAAGG GCGCGAGCGC CCGCGATCTG
GTCGGGCGCG CGGCCGATGC GCGCCGCAGC TTTGCCGAAA TGCCGGTCCT CGATCAGGTC
TGGCGCAACC ATGTTCCCGC GCCGCTGGTG CCGGACGAAG AAGTCAGGAG AAACCGATGA
|
|---|
| Protein sequence | MTDLSVQVGR TRLKNPVIAA SGEHLIDDAG ILSAIAAGAG AVVMKSSNDS AAAQRQLLQA
EYAALDACWN RVDWGPGAPR EATLLTRSGL TPLGFDAWLD QARRMDAAAR KADCVLVASV
VMAGIEDAVR RARAVEDAGL RVFEFNIGTP YASQAAKGAV STELSPARVA ELVGQVTSAV
SIPVWVKLSG QSERVPELVA AATGAGADSA VIAGRALGLV PDLETMQPML GTSCGIGGYW
NLPLTCHWLA MTRARLGAGR ALIGINGACS GRDVARMMLA GASAVGLSSA VMLRGWDVIR
DAVADLDAYC AQKGASARDL VGRAADARRS FAEMPVLDQV WRNHVPAPLV PDEEVRRNR
|
|---|
| |