Gene Pden_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3474 
Symbol 
ID4582030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp620705 
End bp622696 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content68% 
IMG OID639770788 
Producthypothetical protein 
Protein accessionYP_917241 
Protein GI119386186 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AACATCCCTC CCGCCATGTC TTCCGCACCA GCCAGTTGGA GGAGGCCGAC 
GGACCGGGCC ACAATCCGAC CGAAAATCGC ACCATGGGCG AAATCATCGC GGCCCGCTTC
TCGCGCCGCG GCTTCCTGAA GGGCTCGATG GCTGCGACCG CGATCTCGGC CACCGTCAGC
CCCTTCGCCC TGCTGGCTGC CGACGAGGCC CGCGCCCAGG ATGCCGTCGA GGGCTCCGCC
TTCAGCTTTC CCGAGGTCGA GGCGGGCGTC GATGCCGACC ATCACGTCGC CCAGGGCTAT
GACGCGGACA TCCTGCTGCG CTGGGGCGAC AAGGTCTTTG CCGATGCGCC GGATTTCGAC
CCGAAGAACC AGTCCGAGGC CGCGCAGGAA CGCCAGTTCG GCTATAACAA CGACTTCGTC
GGCTTCATCC CGCTGGACGG CGCCGATGAC CGCGGCCTGC TGGTCGTCAA CCACGAATAT
ACCAACGAAC ACCTGATGTT CCCCGGCATC GTTACCGTCG AGGACGGCAA GATCGCCGTG
GCCGAGGCGA CCGAGGCGCG CGTGGACATC GAGATGGCCG CGCATGGCGG CACGGTGATC
GAGATCCGCA AGGTGGACGG AAAATGGCAG CCGGTGCTGG ACGGCGCGCT GAACCGCCGC
ATCACCGCCA AGACGCCGAT GGAGATCTGC GGCCCGGCCA CCGGGCATGC GCGGATGCAG
ACCGCGGCGG ACCCGACCGG CACCCGCGTC CTGGGCACGA TCAACAACTG CGCCGGCGGC
GTCACGCCCT GGGGCACCTA CATCATGGCC GAGGAGAACA TCCACGGCTA TTTCACCGGC
GCGCTGCCCG AAGGCCACCG CGAGGCCGAA AACTACAAGC GCATGGGCAT CCCCGAGGAC
AGCTATGCCT GGGGCAGGTT CCACGACCGC TTCGACATCG GCAAGGAACC GAACGAGCCC
AACCGCTTTG GCTGGATCGT CGAGGTCGAT GTCATGGACC CCACCTCGAC CCCCAGGAAG
CGCACCGCGC TTGGCCGCTT CAAGCACGAG GGGGCGGCGA GCGCCTTGGC CAAGGACGGC
CGCGTCGTCT TCTACCTGGG CGACGATGAG CGTTTCGACT ATGTCTACAA GTTCGTGACC
GCCGGCCGCT ACAACCCGGA CGACCGCGCC GCGAACCTGG ACCTGCTGGA CGAGGGCACG
CTTTACGTCG CGCGCTTCGA CGAGGATGGC AGCTTCGTCT GGCTGCCGCT GGTGCATGGG
CAGGGGCCGC TGACCGCCGA GAACGGCTTC GAGAGCCAGG CCGACGTGCT GATCGAGACC
CGCCGCGCCG CCGACCTGCT GGGCGCGACG CCGATGGACC GCCCCGAGGA CATCGAGCCC
AATGCCGAGA CCGGCCGGGC CTATGTCATG CTGACCAACA ACACCAAGCG CGAAGAGGCG
AACGCCGCCA ACCCGCGCGT GGAGAACGCC TTCGGCCATA TCATCGAGAT TCTCGAGGAT
GGCGGCGACC TGGCGGCGAC GCAGGGCACC TGGGAGATCC TGCTGCAATG CGGCGATCCT
TCGGTGGCCG AGGTCGGCGC GACCTTCTCG ACCGCGACCA CTGCGAATGG CTGGTTCGGC
ATGCCCGACA ACTGCGCCAT CGACAGCGAC GGGCGGCTGT GGGTCTCGAC CGACGGCAAC
TCGCCCAAGG ATACGGGCCG CACCGACGGC CTGTGGGCGG TGGATGTCGA GGGCGCCGCG
CGGGGCACCT CGCGGCTGTT CTATCGGGTG CCCGTGGGTG CCGAGATGTG CGGCCCCTGT
CCGACGCCGG ACCTGACCAC CTTTTTCGTG GCCGTGCAGC ATCCGGGCGA TGGCGGCGAG
GATTGGGAGG GCCACGGCCG GCCGTCCTAT TACGAGGACC TGTCGACCCG CTGGCCGGAT
TTCCGCGACG ACATGCCGGT GCGCCCGGCG GTGGTGGCGA TCACGAAACA GGGCGGCGGC
CGGATCGGCT GA
 
Protein sequence
MTEQHPSRHV FRTSQLEEAD GPGHNPTENR TMGEIIAARF SRRGFLKGSM AATAISATVS 
PFALLAADEA RAQDAVEGSA FSFPEVEAGV DADHHVAQGY DADILLRWGD KVFADAPDFD
PKNQSEAAQE RQFGYNNDFV GFIPLDGADD RGLLVVNHEY TNEHLMFPGI VTVEDGKIAV
AEATEARVDI EMAAHGGTVI EIRKVDGKWQ PVLDGALNRR ITAKTPMEIC GPATGHARMQ
TAADPTGTRV LGTINNCAGG VTPWGTYIMA EENIHGYFTG ALPEGHREAE NYKRMGIPED
SYAWGRFHDR FDIGKEPNEP NRFGWIVEVD VMDPTSTPRK RTALGRFKHE GAASALAKDG
RVVFYLGDDE RFDYVYKFVT AGRYNPDDRA ANLDLLDEGT LYVARFDEDG SFVWLPLVHG
QGPLTAENGF ESQADVLIET RRAADLLGAT PMDRPEDIEP NAETGRAYVM LTNNTKREEA
NAANPRVENA FGHIIEILED GGDLAATQGT WEILLQCGDP SVAEVGATFS TATTANGWFG
MPDNCAIDSD GRLWVSTDGN SPKDTGRTDG LWAVDVEGAA RGTSRLFYRV PVGAEMCGPC
PTPDLTTFFV AVQHPGDGGE DWEGHGRPSY YEDLSTRWPD FRDDMPVRPA VVAITKQGGG
RIG