Gene Pden_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3273 
Symbol 
ID4581834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp439072 
End bp440046 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID639770594 
Producthypothetical protein 
Protein accessionYP_917047 
Protein GI119385992 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000324384 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACGC CCACCCTCAA GGTGGCCTTG CGCACCTATC CCTATACCGA GGCGCTGAAA 
TCCGGCACGG TCGCCGTATC CGGCGCCAAG CTCGAATTCG AGGAGGTGAA GCCCCATATC
GCCGCCTTCC GCCGGATGGT GCGCGACCTG GCCTTCGATG CCTGCGAAAT CGCCCCCACG
ACCTATATCA TCGCACGCGC CTATGGCGTG CCCATCATCG CCTTGCCAGT TTTCTTCGTT
CGCCGCTTTC ATCACGAAGG CCTGGTCGTG CGGCCGGGCG CAGGCATCGA AGCGCCGAAG
GATCTGGAGG GCAAGAATTT CGGCGTCCGC GCCTATTCGG TGACCACCGG CGTCTGGAAA
CGCGGCCTGC TGCAGAACGA ATACGGCGTC GACATCGACA AGGTGAACTG GTGGGTTGAC
GACGAGGAGC ATGTCGCGGC GCTGAAGCTG CCCGCAAACG TCCGGCACGT TGCCGAGGAT
TCCTCGCTGG TCGCGATGAT GGCCGAGGGC AAGCTGGATG CCGCCTGCAC CGGGGATGCC
GGAATCGGGC GCGCCGGCAA GCCCGGCGCG GGCTGGAACG AGAGCGGCCC TGCCCTGCCC
GACGACCTGC GCCAGCTTTT CCCCAATGCC GCAGAACTCG ACCGCGAGGT CTATGCCCGA
AACGGCGTCT ATCCGATCCA CGGCACGCTG GCGATCAAGG AAGAGGTGCT GCAGGCAAAT
CCCGGGCTTG CCCGTTCGCT CTATGATGCC TTTGTCGAGG CCAAGGCCCC CTATCTGCAG
GCGCTTCGCG CCGGCACCGC CACGGGCAAG CAGGCCGAGA AGGACCGCAA GCTGATGCAG
ATCGTCGGTG ACGACCCGCT GCCCTATGGG CTGGAGGCCA ACCGAGCCTC GATCGAGGCG
TTGATCCGCT ACGGCCACCA GCAAGGCCTG ATCCCCCGGC CCTACAAGGC CGAAGACATG
TTCCTGCCGT TCTGA
 
Protein sequence
MSTPTLKVAL RTYPYTEALK SGTVAVSGAK LEFEEVKPHI AAFRRMVRDL AFDACEIAPT 
TYIIARAYGV PIIALPVFFV RRFHHEGLVV RPGAGIEAPK DLEGKNFGVR AYSVTTGVWK
RGLLQNEYGV DIDKVNWWVD DEEHVAALKL PANVRHVAED SSLVAMMAEG KLDAACTGDA
GIGRAGKPGA GWNESGPALP DDLRQLFPNA AELDREVYAR NGVYPIHGTL AIKEEVLQAN
PGLARSLYDA FVEAKAPYLQ ALRAGTATGK QAEKDRKLMQ IVGDDPLPYG LEANRASIEA
LIRYGHQQGL IPRPYKAEDM FLPF