Gene Pden_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3257 
Symbol 
ID4581819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp420270 
End bp420716 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID639770579 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_917032 
Protein GI119385977 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.146193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0594926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGGC AGTCGCCCGC ATTTACGCGG AAAGCTGACC GGCTTTCTGG TAATCCTACA 
GGAGAACACC CTATGGACAG AATCGAAACA GGCCGGCAGG TCCTCCGGGA GTTGATGGGC
GAGGATTTCC TCGTCCAGCG CGCCGGTCGC CGCAACGATT TCAACGCGGC GGTGCAGGAC
TATACCGACG ACGTGTGCTT CGGCACCGTG TGGTCGCCCC CCGGCATCGA CCGCAAGATG
CGCTCGATCC TCAATATCGC AATGTTGACC GCGCTCTGCC GGCCCAATCA GCTCCGCTCG
CATGTCGAGG GCGCGATCAA CAACGGCTGC ACCGTGGAGG AACTGCGCGA GATCTTGCTG
CACACCGCCG TCTACGCCGG CCTGCCGGCG GCGGTCGAGG CATTCAAGGT CGCCGAGGAA
GTGCTGGAGA AGAAGAACTT GCTCTGA
 
Protein sequence
MPRQSPAFTR KADRLSGNPT GEHPMDRIET GRQVLRELMG EDFLVQRAGR RNDFNAAVQD 
YTDDVCFGTV WSPPGIDRKM RSILNIAMLT ALCRPNQLRS HVEGAINNGC TVEELREILL
HTAVYAGLPA AVEAFKVAEE VLEKKNLL