Gene Pden_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3251 
Symbol 
ID4581814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp414737 
End bp415615 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID639770574 
Productalpha/beta hydrolase fold 
Protein accessionYP_917027 
Protein GI119385972 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0874027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.232162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACT TCACCCTCTC GACAGTGCGC AGGCTGCGGG TTCGGGATCT GGACATATGC 
CTGCGTGAAT GGGGCGCGTC CGACGCCCCG CCGCTGGTTC TGCTGCATGG AATACGCGAC
AATTCCATCA CCTTTCAGTT TCTCGTCGAC GAACTGGAGC AGGACTGGCA CATCTTTGCG
CCCGACCTGC GCGGGCACGG ACAGACCGGG CGCGCGGGCA TCCTGTGGCA GCAGGACCTT
CTGGCCGATT GCAGCGCACT TCTGTCGCGG CTTTTCGGGG ATCGTCCGGT GCCGGTTCTG
GGCCACAGCA TGGGCGGCAA CCTTGCTCTT GTCCTTGCCG GGTTACGTCC GGCGCAGGTG
TCGAAGGTCG TGTCGCTGGA TGCGCTGGGG CCGCCGCCAG CGCGGGCAAG CCAGACTCCG
GTGTCCGAAC TCGTGCTCCA TCTAGATCTG GCCGAGCGGC GCGGTTTCCG GCCCGAACGC
CGCTATGGAT CGGTAACACA GATGGCGGAA CGGCTCTGCG CCGCCCACCC GCGTCTGAGC
ATGGCCCGCG CACTCTGGCT GGCGCGTCAC AGCCATCGCG CCGAGGCGGA CGGGTCGCTT
ACTTGGCTCC ACGATATCAA TATTCCCCGG TCGTTGAGTT TCCTGACCGC CGAACGGGAC
TGGATCGACA TATTCCGGCG GATCCGCTGC CCGGCTCTTT ATCTCGCATC CGCCGATACC
ACGCGCCATC TGGCACAGGA CGGCGATGCG CCGATTCTCC GACGCATGGC CGCGATTGCG
GACGGACGTT GGCAGCGGAT TCCAGAAACC TCGCATAATT TGCACTACGA GGAACCGGTC
CTGATCGCGG CGCTGCTGGA GGAGTTTTGG CGGGAATGA
 
Protein sequence
MPDFTLSTVR RLRVRDLDIC LREWGASDAP PLVLLHGIRD NSITFQFLVD ELEQDWHIFA 
PDLRGHGQTG RAGILWQQDL LADCSALLSR LFGDRPVPVL GHSMGGNLAL VLAGLRPAQV
SKVVSLDALG PPPARASQTP VSELVLHLDL AERRGFRPER RYGSVTQMAE RLCAAHPRLS
MARALWLARH SHRAEADGSL TWLHDINIPR SLSFLTAERD WIDIFRRIRC PALYLASADT
TRHLAQDGDA PILRRMAAIA DGRWQRIPET SHNLHYEEPV LIAALLEEFW RE