Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3200 |
Symbol | |
ID | 4581764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 364380 |
End bp | 365702 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770524 |
Product | conjugal transfer protein TrbL |
Protein accession | YP_916977 |
Protein GI | 119385922 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.460801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGAT CCGGCGTCAT CGACAATTTC CTGGCGGTCT TCACCAGCTA TATCGACAGC GGCTTCGGTC TTCTGGGCGG CGAGGTCGCC TTCATCGCCA CCACGCTGAT CGTCATCGAC GTGACGCTGG CCGCCCTGTT CTGGGCCTGG GGCGCCGAGG ACGATATTCT GGCCCGGCTG GTGAAGAAGA CCATCTTCGT CGGCGTCTTC GCCTGGCTGA TCACCAACTG GAACAGTCTC GCGCGCATCG TCTTCGACAG TTTCGCCGGT CTCGGGCTCA TGGCCTCCGG CACCGGCTTC ACCGCCGCCG ATCTCATGCG CCCCGGCCGC GTCGCCCAGA CCGGGCTCGA TGCCGGACGG CCGCTCCTGG AATCCATCTC CGACCTGATG GGCTGGGTCG CGGTGTTCGA GAACCTGATC CAGATCCTCT GCCTGTTCTT CGCCTGGGCG CTGGTGATCC TCGCCTTCTT CATCCTCGCC GTGCAGCTCT TCGTCACCCT GATCGAGTTC AAGCTGACCA CGCTCGCGGG CTTCGTGCTG ATCCCCTTCG GGCTTTTCGG CAAGACCGCC TTCATGGCCG AGCGCGTGCT GGGCAATGTC GTCTCCAGCG GTATCAAGGT TCTCGTGCTA GCCGTCATCA TCGGCATCGG CAGCACCTTG TTTTCGCAGT TCACCACCGG CTTCGGCGGT GTCGCGCCGA CCGTGGACGA CGCCATGGCC ATCGTACTCG CGGCGCTGTC GCTCTTGGGC CTCGGTATCT TCGGGCCCGG TATCGCCACC GGCTTGGTTT CCGGCGGTCC GCAGCTTGGC GCCGGGGCCG TTGCGGGGAC AGGACTGGCC GTGGGCGGCG CGGCACTGGC CGCCGGCGGC GCTGCGGTGC TCGGCGCCAA GGGCGTCGCT GCCACCGCGC GGGGCGGGGC CGCGACGGCG GGGGCCGCCT CCGCCGCCTA TACGCTGAAC TCGGCCGGAC AGTCCGGGAT CGGCGGCGCC GTCTCCGGGG CCGCCGGTGT CGGCAAAGGC GCCGGCATCG CCGCCATGAC CCCGCTGCGC CGGGCGGCGG CCAGTCTCAA GGCCAGCCGC GACGCCGGCG TGAAAGCCGC CTTCACCAGC ACCGGGGGAT CGACCACGCA AGGAACGCTC GGCGGCCCGG CCGCTGGTGT CGGCGGTGTG GCGCCAACCA GCGGCAATGC GCCCGCCTGG GCGCAGCGCC TGCGCGGCCA GTCCCTTGCC CGGGGCGCCA CCGTCACCGC CCATGCGGTG CGCGCCAGTG ACAGCCACGG CCCCGGCGCC TCCGTCTCCC TTTCCGAAAG CGACAAGCCA TGA
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Protein sequence | MGGSGVIDNF LAVFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWAW GAEDDILARL VKKTIFVGVF AWLITNWNSL ARIVFDSFAG LGLMASGTGF TAADLMRPGR VAQTGLDAGR PLLESISDLM GWVAVFENLI QILCLFFAWA LVILAFFILA VQLFVTLIEF KLTTLAGFVL IPFGLFGKTA FMAERVLGNV VSSGIKVLVL AVIIGIGSTL FSQFTTGFGG VAPTVDDAMA IVLAALSLLG LGIFGPGIAT GLVSGGPQLG AGAVAGTGLA VGGAALAAGG AAVLGAKGVA ATARGGAATA GAASAAYTLN SAGQSGIGGA VSGAAGVGKG AGIAAMTPLR RAAASLKASR DAGVKAAFTS TGGSTTQGTL GGPAAGVGGV APTSGNAPAW AQRLRGQSLA RGATVTAHAV RASDSHGPGA SVSLSESDKP
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