| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3179 |
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| Symbol | |
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| ID | 4581743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 346902 |
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| End bp | 348014 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639770503 |
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| Product | replication protein A |
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| Protein accession | YP_916956 |
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| Protein GI | 119385901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACGT CCCGCCGCAC CCGTCTTTCC GGCGAGCGCC GCCGCCTCAG CCCCTTCGTG
GTGACGGGCA CGGGCGGCGA GGTCCGCCCG CGCGATCAGC GCGATCTGAT GGAACGTCCG
TTCTTCTCGC TCGCAAAGAC CAAGCGCCTG ACGCCCATTC ACTATGAATC CGGCGGTGTC
CAGGTCCATG TCCAGGGCTT TCCCGAGCAC GGCATGGCGA CCATCTGGGA TGCCGACGTG
CTGATCTGGG CCGCCAGCCA GATCGTCGAT GCCGAGAACG CCGGGCTGCA AACCTCGCGC
TTCCTGCGTT TCACCCCCTA CCAGCTCCTG ACCGCCATCG GCCGCCAGAC CGGCGCGCGC
GACTATCGCC TGCTGAAAGG CACGTTGGCG CGGCTGCAGT CGACGGTGAT CCGGACCACG
ATCCGGCATG GCGAGCACTG GCGCCGACAC CAATTCTCCT GGATCGGCGA GTGGGAAGAG
ATGACGACAG CCGGGGGCCG GGTCGAGGGC ATGGAATTCG TGCTGCCCGA ATGGTTCTAT
CGCGGCGTGC TCGACCGCTC GCTGGTCCTG ACCATCGACC CGGCCTATTT CCGGCTCAAG
GGCGGCATCG AGCGCTGGCT CTACCGCGTC GCCCGCAAGC ATGCGGGTCG CCAGCCATCC
GGCTGGTGCT TCGACATCCC GCATCTGCAT GCGAAGTCGG GCAGTCTCGT CCGCCTGTCG
GATTTCGCGC TTCAGATCAG ACGGATTGCT CAACGGCAAT CCCTGCCGGG ATATCGGCTG
CGGATCGAGC GCCGAGGCGA TGTCGAGATG CTGCGGATCC AGCCTGTGAG TTATCCACAA
CGACTTGTGG ATAACTGCGT GAATGGTATC GGGACTTCGG ACGCACGAAA TGTGGACGAT
ATCGGGACAT CACACGCAGG ACTATCGGGA CTTCGCACGC ACGGATCGCA GTCAAGCCTT
TGGGATAGCA AAGGGAATCC GGCCCGTAAC TTATCTAACT TAAAAGACTC TAACATAGTA
GAGGCGCGCC GGGCGGTGGA TAACCCCCGC CCGGGCGCCC ATACGGTCCC TCATTCGCGA
AACCGGCGCG GGCCGGAAGG GGGCGGCGAA TGA
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| Protein sequence | MRTSRRTRLS GERRRLSPFV VTGTGGEVRP RDQRDLMERP FFSLAKTKRL TPIHYESGGV
QVHVQGFPEH GMATIWDADV LIWAASQIVD AENAGLQTSR FLRFTPYQLL TAIGRQTGAR
DYRLLKGTLA RLQSTVIRTT IRHGEHWRRH QFSWIGEWEE MTTAGGRVEG MEFVLPEWFY
RGVLDRSLVL TIDPAYFRLK GGIERWLYRV ARKHAGRQPS GWCFDIPHLH AKSGSLVRLS
DFALQIRRIA QRQSLPGYRL RIERRGDVEM LRIQPVSYPQ RLVDNCVNGI GTSDARNVDD
IGTSHAGLSG LRTHGSQSSL WDSKGNPARN LSNLKDSNIV EARRAVDNPR PGAHTVPHSR
NRRGPEGGGE
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