Gene Pden_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3013 
Symbol 
ID4581579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp185967 
End bp186746 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID639770339 
ProductABC transporter related 
Protein accessionYP_916792 
Protein GI119385737 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.101596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.872356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA TCCAGGGCCT GACGGTCGGC TATGGCCGAA AGCCGGTCAT TCGCGGGCTG 
GACGCCAGCT TCGCGCCAAG GCGCTTCACC GCGCTGGTCG GGCCGAACGG CTGCGGCAAA
TCGACGCTGC TGAAGGCGGT GATGGGCTTT CTGCGTCCCC AGGCCGGCCG CGTCACGCTG
GACGGCGTGC CCATGGCGCG CATCCCGCGC CGGGCGCTGG CACGGCGCAT CGCCTGGCTG
CCGCAAGAGA ATCATTGCCC CGACTACCTG ACCCTGGGCG AGCTGGTCGA GATGGGCGGC
CATGCCCGGC AGGGGCTTTT CGCCGGGCCG GACGACCGCG ACCGGCTGCT GTTTCGCGAG
GCGCTGCGCA CCGTCGGGCT GCAGGATCAG GCACATCTGC CGGTCAATGC CCTGTCCGGC
GGCCAGCGGC AGCGTGCCTT CATCGCCATG GTGCTGGCGC AGGACACGCC CATCGTGCTG
ATGGACGAGC CGGTGAACCA CCTGGACGTC ACCTATCAAT ATGCCCTGCT GGGGCTGGTG
CGCGACCTGA CGCGGCGCCA TGGCCGCACG GTGGTCTCGG TCCTGCACGA CCTGAACCTG
GCGCTGAGCT TCGCCGACGA GGTGGTGATG ATGTCAGGGG GCGAGGCCCG CGCCTCGGGG
CCGGTGGCCG AGGTCCTGAA CGCCGCGAAC CTGCGCGAGG TCTTCGACCT CGACGCGCAG
GTCATCCGCC ACGAGGGGCG GCGGATCTGC CTGCCCGCCC TGCCGGAGCC CAGCGCATGA
 
Protein sequence
MIRIQGLTVG YGRKPVIRGL DASFAPRRFT ALVGPNGCGK STLLKAVMGF LRPQAGRVTL 
DGVPMARIPR RALARRIAWL PQENHCPDYL TLGELVEMGG HARQGLFAGP DDRDRLLFRE
ALRTVGLQDQ AHLPVNALSG GQRQRAFIAM VLAQDTPIVL MDEPVNHLDV TYQYALLGLV
RDLTRRHGRT VVSVLHDLNL ALSFADEVVM MSGGEARASG PVAEVLNAAN LREVFDLDAQ
VIRHEGRRIC LPALPEPSA