Gene Pden_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3009 
Symbol 
ID4581575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp182560 
End bp183015 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content75% 
IMG OID639770335 
Productchorismate mutase related enzymes 
Protein accessionYP_916788 
Protein GI119385733 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01803] chorismate mutase related enzymes 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0745202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.579719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG CCGTCGTGGC GCCCGAGGAT CTGGCGCCGG ACCTGGTCCC GCCGGAAGCC 
GTGGCGGGGC TGGGCGACGT CCGGCGCGGC ATCGACATGA TCGACGCCCG CATCGTCGGG
CTGCTGGGGC TGCGGCTGCG CTATGTGCTG GCCGCGGCGG ACTTCAAGCC CGACATCGCC
TCGATCCCCG CGCCGGAGCG GGTGCGGCAG ATGCTGGACG AACGCGCGGC CTGGGCCGCC
GAGGCGGGCC TCGCCCCCGA TTTCATCGGC CCCCTGTTCG GGCAGGTGGC GGAATGGTTC
ATCCGCCAGC AGGTGGCGCA TTGGCGGGCC TGCCGTGCGG GGCAATCGGC TGCAGACCAC
CGCCGGTCGT CGGCCCCGGC GCCGTCGCCG TCAGCGCGGC CTCCCAGCGA GCCAGCCCTC
GACCGCGTCG AGCGTGTGCA TGGCGCTGGC GACTGA
 
Protein sequence
MSPAVVAPED LAPDLVPPEA VAGLGDVRRG IDMIDARIVG LLGLRLRYVL AAADFKPDIA 
SIPAPERVRQ MLDERAAWAA EAGLAPDFIG PLFGQVAEWF IRQQVAHWRA CRAGQSAADH
RRSSAPAPSP SARPPSEPAL DRVERVHGAG D