| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2981 |
|---|
| Symbol | |
|---|
| ID | 4581547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 156564 |
|---|
| End bp | 157625 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639770307 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_916760 |
|---|
| Protein GI | 119385705 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.861253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.24381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTT CCGCGACAGT CCCTGTCCGG CGACGCTCCC TGGGCCTGTC GCGGCTGATC
CTTGGGCTGG CGGCGCTGAT CGCGGCGCTG GCCTTCGGGG TTTCCGTGGG CGAGACCGTC
ATTGCGCCCG AGGTCATCTG GAAGACGTTG TCGAACCAGC TCTTCGGCAC CGACTATCCC
CTGCGCCCCA TCCAGGAAGG CATCGTCTGG AACTATAGGC TGACGCGGGC CATCGTCGCG
GCGGCATGCG GGGCGGGGCT GGCGGTCTCG GGCGTGGTCT TGCAGGCGCT TTTGCGCAAT
GCGCTGGCCG ATCCCTATAT CCTGGGGATT TCGGCCGGGG CCTCGACCGG GGCGGTGCTG
GTCATGGTGC TGGGCATCGG AGCAGGCGCG CTGTCGCTGT CGGTCGGCGC CTTCGCGGGC
GGCATCCTGG CCTTCACGCT GGTCATCGGG TTGGCGCGCG CTGCGGGCAG CGGCATCGGC
CTGCCGCAAG CGGGGCTGAT CATCCTGTCG GGCATCGCGG GGACGCAGCT TTTCAATGCG
CTGACCTCTT TCGTGATCGC GCAATCGGCC AATGCCGAGC AGGTGCGTGG CGTCACATTC
TGGATGATGG GCAACATGAG CGGGGTGCGC TGGCCCGACG TGCGGCTGGC GGTGCCGGTC
TCTGCCTTGG GGGTGCTGGT CTGCATGGCG CATGCGCGGG CATTGGACGC CTTCACCTTC
GGGGCGGAAT CGGCCGTCAC CATGGGCGTC GCGGTGCGCC GCACGCAGGC GGTGCTGATC
GGGGTGGTGA CGATGATCAC CGCCACCATG GTCAGCATCA CCGGCGCCAT CGGCTTCGTC
GGCTTGGTGA TCCCCCATGC CGCGCGCTTC CTGGTGGGCG TCAGGCACGA CCGGCTGTTG
CCGGCCTCGG CGCTGATCGG CGCGGTGTTC CTGGTCATGG CCGATGTCGT CTCGCGCGTG
ATCGTGCCGG GGCAGGTGCT GCCCATCGGG GTGATCACCG CGCTGGTCGG GGCGCCGGGC
TTCGCCGTCA TCCTGATCCG GGGACGGAGG CAGCGCGCAT GA
|
|---|
| Protein sequence | MTASATVPVR RRSLGLSRLI LGLAALIAAL AFGVSVGETV IAPEVIWKTL SNQLFGTDYP
LRPIQEGIVW NYRLTRAIVA AACGAGLAVS GVVLQALLRN ALADPYILGI SAGASTGAVL
VMVLGIGAGA LSLSVGAFAG GILAFTLVIG LARAAGSGIG LPQAGLIILS GIAGTQLFNA
LTSFVIAQSA NAEQVRGVTF WMMGNMSGVR WPDVRLAVPV SALGVLVCMA HARALDAFTF
GAESAVTMGV AVRRTQAVLI GVVTMITATM VSITGAIGFV GLVIPHAARF LVGVRHDRLL
PASALIGAVF LVMADVVSRV IVPGQVLPIG VITALVGAPG FAVILIRGRR QRA
|
|---|
| |