| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2961 |
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| Symbol | |
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| ID | 4581528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 129721 |
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| End bp | 130935 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639770288 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_916741 |
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| Protein GI | 119385686 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0688602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.546759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA TCAAGGTAGA GAACCCCGTC GTCGAACTCG ACGGCGACGA GATGACCCGG
ATCATCTGGG ATTTCATCAA GAAGAAGCTG ATCCTTCCCT ATCTGGACCT CGACCTGAAA
TATTACGACC TGGGCATCGA GGAGCGCGAC GCGACCTCGG ACCAGATCAC CGTGGACGCG
GCCGAGGCGA TCAAGCAATA CGGCGTCGGC GTGAAATGCG CCACCATCAC CCCCGACGAG
GCGCGGGTCG AGGAATTCGG CCTGAAGAAG ATGTGGAAAT CGCCCAACGG CACCATCCGC
AACATCCTGG GCGGCGTGAT CTTCCGCGAG CCGATCATCT GCAAGAACGT GCCGCGCCTG
GTCCCCGGCT GGACCCAGCC CATCGTCGTC GGCCGCCACG CCTTCGGCGA CCAGTACAAG
GCCACCGATT TCCGCTTTCC GGGCAAGGGC AAGCTGACGA TCAAGTTCGT CGGCGAGGAT
GGCGAGACCA TCGAGCACGA GGTCTATCAG GCCCCCGGCG CCGGCGTCGC CATGGCGATG
TACAACCTCG ACCAGTCGAT CATCGACTTC GCCCGCGCCT CGATGAATTA CGGGCTGAAC
CGCGGCTACC CGGTCTATCT CTCGACCAAG AACACCATCC TGAAAGCCTA TGACGGCCGC
TTCAAGGACC TGTTCCAGAA GGTCTACGAG GAAGAATTCG AGGCCGAGTT CAAGAAGAAG
GGCATCCATT ACGAGCATCG CCTGATCGAC GACATGGTCG CCTCGGCGAT GAAATGGTCG
GGCGGCTATG TCTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCGGA TACGGTTGCG
CAGGGCTTCG GCAGCCTGGG GCTGATGACC TCGGTGCTGA TGACGCCGGA CGGGAAGATC
GTCGAGTCCG AGGCCGCGCA TGGCACGGTG ACGCGCCACT ATCGCGAGCA CCAGAAGGGC
AACCAGACCT CGACCAACTC GATCGCCTCG ATCTTTGCCT GGACCGGCGG GCTGAAGCAC
CGCGCCAAGC TGGACGACAA CGCGGCGCTG CTGAACTTTG CCCAGACGCT GGAGCGGGTC
ACCGTGCAGG CGGTCGAGGA CGGCTTCATG ACCAAGGATC TGGCGCTGCT GGTGGGCCCG
GACCAGAAAT GGCTGACCAC CATGGGCTAT CTGGAAAAGG TCGACGAATA CCTGAACAAG
GCGCTGGCGG GCTGA
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| Protein sequence | MSKIKVENPV VELDGDEMTR IIWDFIKKKL ILPYLDLDLK YYDLGIEERD ATSDQITVDA
AEAIKQYGVG VKCATITPDE ARVEEFGLKK MWKSPNGTIR NILGGVIFRE PIICKNVPRL
VPGWTQPIVV GRHAFGDQYK ATDFRFPGKG KLTIKFVGED GETIEHEVYQ APGAGVAMAM
YNLDQSIIDF ARASMNYGLN RGYPVYLSTK NTILKAYDGR FKDLFQKVYE EEFEAEFKKK
GIHYEHRLID DMVASAMKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMTPDGKI
VESEAAHGTV TRHYREHQKG NQTSTNSIAS IFAWTGGLKH RAKLDDNAAL LNFAQTLERV
TVQAVEDGFM TKDLALLVGP DQKWLTTMGY LEKVDEYLNK ALAG
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