| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2959 |
|---|
| Symbol | |
|---|
| ID | 4581526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 127780 |
|---|
| End bp | 128439 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639770286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916739 |
|---|
| Protein GI | 119385684 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.483607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAC TGATTTTCCC CGGTCCCGAA GGTCGTCTGG AAGGCCGCTA TCACGCGCAA
GCCGCCCCCG ACGCCCCCAT CGCCATCATC CTGCACCCGC ATCCGCAATA CGGCGGGACG
ATGAACAACC GGGTCGTCTA TAACCTGCAC TATGCCTTTC ACCGCATGGG CTTTACCGTC
ATGCGGTTCA ATTTCCGCGG CGTCGGCCGC AGCCAGGGCG AATTTGACCA GGGCATCGGC
GAGCTGTCGG ATGCCGCCTC GGCGCTGGAC TATCTGCAAG CGATGAACCC CAACAGCAAG
CATTGCTGGG TGGCGGGCTT CAGCTTCGGC GCCTGGATCG GCATGCAACT GCTGATGCGC
CGGCCCGAGA TCACCGGCTT CATCTCGGTC GCGCCGCCGG CGAACATGTA TGATTTCTCG
TTCCTTGCGC CCTGCCCGTC CTCGGGGCTG ATCATCAACG GCACCGCCGA CCGCGTGGCG
CCGCCCAAGG ACACCCATGC GCTGGTCGCC AAGCTGCGCG AGCAGAAGGG CATCACCATC
ACCCATGAGG AAATCGAGGG GGCGGACCAC TTCTTCCGCG ACGACGAGGT CCACATGAAG
CCGATGATCG ACACGGTGCA GGCCTATGTG CGCCGCCGCC TGACCGAGAA CACCCGCTAG
|
|---|
| Protein sequence | MPELIFPGPE GRLEGRYHAQ AAPDAPIAII LHPHPQYGGT MNNRVVYNLH YAFHRMGFTV
MRFNFRGVGR SQGEFDQGIG ELSDAASALD YLQAMNPNSK HCWVAGFSFG AWIGMQLLMR
RPEITGFISV APPANMYDFS FLAPCPSSGL IINGTADRVA PPKDTHALVA KLREQKGITI
THEEIEGADH FFRDDEVHMK PMIDTVQAYV RRRLTENTR
|
|---|
| |