| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2887 |
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| Symbol | |
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| ID | 4581415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 50705 |
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| End bp | 54595 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639770214 |
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| Product | putative phage host specificity protein |
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| Protein accession | YP_916667 |
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| Protein GI | 119385612 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0568102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.211291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TTCTGCTGGC GGCGGTGGGC GCATCGCTGG GTGCGGGCTT TGGCGGCACG
GTTCTGGGGC TTTCGGGCGC CGTCATCGGC CGGGCCGTGG GCGCGACGCT GGGGCGCGTC
ATCGACCAGC GCCTGCTGGG CGGCGGCTCG AAGGCGGTCG AGACCGGGCG CGTGGACCGG
ATGCGCATCC AGACCGCAGG CGAGGGCACG CCGATCCCGC GGCTTTGGGG GCAGATGCGG
GTGCCGGGCC ATGCGATCTG GGCCGGCCCG CTGGTCGAGA CTCGGCGCAG CCATGGCGGC
GGCAAGGGCT CGGGGCCGCG CGTGACCGAG ATCGGCTATC GGCTGAGCTT TGCGCTGGCG
CTGTGCGAGG GGCCGATCCT GGGCGTGGGC CGGATCTGGG CGGATGGCGA GGAGATCTCG
GCCGACGATC TGGACATGCG GGTCTATCCG GGCGACGAGG CGCAGCTGCC CGACCCGGCC
ATCGCCGCGC AGGAGGGCGA TGCGGCCCCC GCCTATCGCG GCATCGCCTA TGTCGTGTTC
GAGGACCTGG CGCTGGAGAG ATGGGGCAAC CGGGTGCCGC AGCTGTCCTT CGAGGTGACG
CGGGCGGCCA GGGACGGCCG GGGGCTGTCG CGCGAGGTGC AGGCGGTGGC GATGATCCCC
GGCACCGGAG AGTATTCGCT GGCGACCACG GCGGTCAGCT ATGACCTGGG CCTGGGCGAG
ATGCAGGTGG CCAATCGCAA CACGGCGCTG GCGCCGACCG ATTTCCTGGC CTCGATGCGG
ATCCTGGGGC GGGAATTGCC GAATGTCGGC TCGGTCTCGC TGGTGGTGTC CTGGTTCGGC
GACGACCTGC GGGTCGGCGA ATGCGCGGTG CGGCCCAAGG TCGAGGACCT GTCGCGCGAC
GGGCAGGGGA TGGCCTGGCG CGCGGGCGGC ATCGGGCGCA ACGGCGCGGC CGAGGTGGCG
CGGGTGGACG GGCGGCCGAT CTATGGCGGC ACGCCGGCGG ACGGCTCGGT GATCGAGGCG
CTGCGGGCCA TCGCCGGGAG CGGGCGCAAG GCGGTGTTCT ATCCCTTCAT CCTGATGGAG
CAACTGGCGG GCAACGGCCG GCCCGATCCC TGGAGCGGGG CGGCGGACCA GCCGGTCATG
CCCTGGCGCG GACGGATCAC CACCAGCATC GCCCCGGGGC AGGCGGGCAG CCCGTCGGGC
ACCGCTGCGG CCGAGGCCGA GGTGGCGCGG TTCTTCGGCA CCGCCGAGGC GGCGGATTTC
TCGCGCGATG GCCTGACGAT CCGCTATGAC GGGCCGGACG AGTGGTCCTA TCGCCGGTTC
ATCCTGCATT ACGCGCATCT TTGCGCCGCA GCGGGCGGGA TCGACGCCTT CCTGATCGGG
TCCGAGATGG TCGGGCTGAC GACGATCATG GCGGCCGGCC ATTCCTTCCC GGCGGTCGCG
CAGCTGCGGC GGCTGGCGGC GGATGTGCGC GCCATCCTGG GCGAGGGGGT CAGGATCGGC
TATGCCGCGG ACTGGTCGGA ATATTTCGGC CATCACCCCG GCAACGGCGA TGTGCATTTC
CATCTGGACC CGCTGTGGGC GGATGAGAAC ATCGACCTGA TCGGCATCGA CAACTACATG
CCGCTGTCGG ACTGGCGCGA GGGCGAGGAG CATCTGGACG CCCATTGGGG GCGCATCGAC
GATCCGGCCT ATCTGCGCGC CAATGTCGCG GGGGGCGAGG GCTACGACTG GTATTATGCC
AGCGAGGCCG ACCGGCAGGC GCAGCGCCGC ACCGAGATCC GCGACGGCGC GCATCACGAG
CATTGGGTCT GGCGTTACAA GGACATCCGG GGCTGGTGGC GGAATGCGCA TCACGACCGC
ATCGGCGGGG TGCGGCAGGC GCTTCCGACG GCCTGGGTGC CGCGCTCGAA ACCCGTCTGG
TTCACCGAGA TGGGCTGCGC GGCGCTGGAC AAGGGCACGA ACCAGCCGAA CAAGTTCCTG
GATGCGATGA GTTCGGAATC GATGCTGCCC TATTTCTCGG ACGGGCGGCG GGACGATGGG
ATCCAGGCGG CCTATGTGCG GGCGATGACC GGGTTCTGGT CGGACCCGGC GAACAATCCG
GCGCGCGCGG CATTCGGCAG GACCGGGGCG GGGCGGATGA TCGACATGGG CCGCGCGCAT
GTCTGGTGCT GGGACGCGCG GCCCTATCCG GCCTTCCCGG CGCGCACCGA CCTGTGGTCG
GACGGCCCGG CATGGGAGCG CGGGCATTGG CTGAACGGCC GGGCGGGCGC CGTGCCGCTG
GCCGATGTGG TGGCCGAGAT CTGCCGCGAG GCGGGGGTGC GCGCCTTTGA CGCCGAGGGA
CTGCGCGGGC TGGTGCGCGG CTATGTGCTG TCGGGGGCCG AGACGGGGCG GGCGGCCCTG
CAACCCTTGA TGCTGGCGCA TGGGTTCGAC GCGGTCGAGC GCGACGGCGT TCTGCGCTTC
GTCATGCGCG GCGCGCGCGT CGATGCGGAA CTGGGGCCCG GTGACATGGC GCTGGCCGAG
GAGGTCGATG CGGTCGAGGT CTCGCGCGCC GCCGATGCCG AGATGGTCGG GCGCATCCGG
CTGACCCATG TCGAGGCGGG CGGCGACTAC GCGGCGCGCA CGGCCGAGAC GGCGATGCCG
GGGGCGGAGT TCCTGGCGGT TTCGGACAGC GAGCTGGCGA TGGCGCTGAC CCGCGGCGAG
GGCCGGGCGC TGGCGGAACG CTGGCTGTCG GAAGCGGCGG TGGCGCGGGA TGCGGTGCGC
TTTGCCCTGC CGCCCTCGTT GGGGCATCTG GGGCCGGGGG ACGTGGTGCG GCTGGTCGAG
CCGGGTGTCG AGGCAAGGCG CTGGCGCATC GACCGCACCG AGCGGGCAGG CGCGATCACC
GTGGATGCGG TGCGGGTCGA GCCGGGGGTC TATCGCCCGG CCCGCGTGGT CGAGGGCGAG
GCGGCGTTGC GGCCCTTCGT GCCGCCGATC CCGGTCTGGC CGGTTTTCCT GGACCTGCCG
CTTTTGCGCG GCGACGAGGT GGCGCATGCG CCGCATCTGG CGGTGACGGC GACGCCGTGG
CCGGGGGCGG CGGCGGTCTG GGCCTCGACC GAGGAGGCGG GGGGATACGC GCTGAACACG
ACGCTGGCCG AGCCCTCGGC CATGGGGCGC ACGGAAGGCC CGCTTGCGGC GGCGCGGCCG
GGGGTCTGGG ATCGCGGCCC GCCGCTGCGG CTGCGGGTCA AGGGCGGCAA CCTGCGCTCG
GCCGGGGTCG AGGCGCTGAT GGCCGGGGCG AACCTGCTGG CGATCGGCGA CGGTTCGGCC
GAGGGCTGGG AGCTGCTGCA ATTCGCCGAG GCGCGGCTGG TCTCGGCCGG GCTGTGGGAG
ATCTCGCTGC GGCTGCGCGG GCAGGCGGGG ACGGATGCCT TCATGCCGGC GGTCTGGCCG
GCGGGCAGCG TGGTGGTGGT GCTGGACGGG GCGGCGCAGC AGGTGGAGCT GGCGCCTTCG
GCCCGCAACC AGTTGCGGCA TTGGCGCATC GGGCCGGCCA CGCGCAGCCC GGACGATGCC
AGCCATCGCC ATGTCGCCGC GGCGTTCCGC GGTGCCGGGC TGCGGCCGTT GTCGCCCTGT
CATATCGCGG TCAGCGGCCG GGTCGTCACA TGGATCAGGC GCACGCGGGT GCAGGGCGAC
GGCTGGGACG GGCCGGACGT GCCGCTGGGC GAGGCGCAGG AGCGTTACGC GGCCCGGCTG
GTCCGGGACG GGCAGGTGCT GGCCGAGGCC GTGGTCGCGG AGCCGCGCTG GGCGGTGCCC
GAGGGTGTGT GGTCCCAGGC CATCGCCGGC GGAGGGTTTG CCGTCGAGGT CGCCCAGCTT
TCCGACACGT TCGGGCCGGG ACCGTTTGCA AGGAGGATGA TCGATGCCTG A
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| Protein sequence | MATILLAAVG ASLGAGFGGT VLGLSGAVIG RAVGATLGRV IDQRLLGGGS KAVETGRVDR
MRIQTAGEGT PIPRLWGQMR VPGHAIWAGP LVETRRSHGG GKGSGPRVTE IGYRLSFALA
LCEGPILGVG RIWADGEEIS ADDLDMRVYP GDEAQLPDPA IAAQEGDAAP AYRGIAYVVF
EDLALERWGN RVPQLSFEVT RAARDGRGLS REVQAVAMIP GTGEYSLATT AVSYDLGLGE
MQVANRNTAL APTDFLASMR ILGRELPNVG SVSLVVSWFG DDLRVGECAV RPKVEDLSRD
GQGMAWRAGG IGRNGAAEVA RVDGRPIYGG TPADGSVIEA LRAIAGSGRK AVFYPFILME
QLAGNGRPDP WSGAADQPVM PWRGRITTSI APGQAGSPSG TAAAEAEVAR FFGTAEAADF
SRDGLTIRYD GPDEWSYRRF ILHYAHLCAA AGGIDAFLIG SEMVGLTTIM AAGHSFPAVA
QLRRLAADVR AILGEGVRIG YAADWSEYFG HHPGNGDVHF HLDPLWADEN IDLIGIDNYM
PLSDWREGEE HLDAHWGRID DPAYLRANVA GGEGYDWYYA SEADRQAQRR TEIRDGAHHE
HWVWRYKDIR GWWRNAHHDR IGGVRQALPT AWVPRSKPVW FTEMGCAALD KGTNQPNKFL
DAMSSESMLP YFSDGRRDDG IQAAYVRAMT GFWSDPANNP ARAAFGRTGA GRMIDMGRAH
VWCWDARPYP AFPARTDLWS DGPAWERGHW LNGRAGAVPL ADVVAEICRE AGVRAFDAEG
LRGLVRGYVL SGAETGRAAL QPLMLAHGFD AVERDGVLRF VMRGARVDAE LGPGDMALAE
EVDAVEVSRA ADAEMVGRIR LTHVEAGGDY AARTAETAMP GAEFLAVSDS ELAMALTRGE
GRALAERWLS EAAVARDAVR FALPPSLGHL GPGDVVRLVE PGVEARRWRI DRTERAGAIT
VDAVRVEPGV YRPARVVEGE AALRPFVPPI PVWPVFLDLP LLRGDEVAHA PHLAVTATPW
PGAAAVWAST EEAGGYALNT TLAEPSAMGR TEGPLAAARP GVWDRGPPLR LRVKGGNLRS
AGVEALMAGA NLLAIGDGSA EGWELLQFAE ARLVSAGLWE ISLRLRGQAG TDAFMPAVWP
AGSVVVVLDG AAQQVELAPS ARNQLRHWRI GPATRSPDDA SHRHVAAAFR GAGLRPLSPC
HIAVSGRVVT WIRRTRVQGD GWDGPDVPLG EAQERYAARL VRDGQVLAEA VVAEPRWAVP
EGVWSQAIAG GGFAVEVAQL SDTFGPGPFA RRMIDA
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