Gene Pden_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2864 
Symbol 
ID4581451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp31102 
End bp31605 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID639770191 
Productthioesterase superfamily protein 
Protein accessionYP_916644 
Protein GI119385589 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.382014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAC GCAACGAATC CCTGGACGCC ATCAAGACGC GGCGCAACAA CACGCTGAAC 
GCGCTGGTTT CCAGCGTGCC CTATATCCGC TGGCTGGGCA TCGGCTTCGA CCGCCGCGGC
GACGAGCTGA CCGCGGTGCT GCCCTTCGAC GAGAAGCTGA TCGGCAATCC GATGCTGCCG
GCGATCCATG GCGGGGTGAC GGCGGCTTTC CTGGAGGTGA CCGCCATCGT CGAGCTGACC
TGGACTGCGA TCTGGGAGGA CATGGAGCAG GGCCGCATCG CCCCCGACGC CGCCGTGCCC
GAAAGCCTGC CGCGCCTGCC CAAGACCATC GACTTCACCG TGGATTACCT GCGCTCGGGC
CTGCCGCGCG ACGCCTATGC CCGCGCGCGG GTGGTCCGGT CCGGGCGGCG CTATGCCAGC
GTGCATGTCG AGGCATGGCA GGACCAGCGC CAGAAGCTTT TCGCCCAGGC GACCGGGCAT
TTCCTGATGC CGCAGGATGG TTGA
 
Protein sequence
MARRNESLDA IKTRRNNTLN ALVSSVPYIR WLGIGFDRRG DELTAVLPFD EKLIGNPMLP 
AIHGGVTAAF LEVTAIVELT WTAIWEDMEQ GRIAPDAAVP ESLPRLPKTI DFTVDYLRSG
LPRDAYARAR VVRSGRRYAS VHVEAWQDQR QKLFAQATGH FLMPQDG