| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2835 |
|---|
| Symbol | recF |
|---|
| ID | 4581402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 2958 |
|---|
| End bp | 4034 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639770162 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_916615 |
|---|
| Protein GI | 119385560 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTGA GCCTGCTGCA CCTGACCCAG TTTCGCAGCT GGGCCAGGCT GGAGATCGAG
GCCGACCACC GCCCCGTCGC CATCCATGGC CCGAACGGGG CGGGCAAGAC CAATATCCTG
GAAGCCGTCT CGATGCTGTC GCCCGGCCGG GGCATGCGCG GCGCCGCACC CGGCGACCAG
GCCCGCAAGG GGCCGGAGGT CGGCTGGCAG ATCCGGGCCG AAATCGGCAC CCATCAGGTG
CTGACCCGCG CGCTGCCCGG CCAGCCGCGC GAGGTGGTGA TCGACGAAAA GCCCTCGACC
CAGATCGCGC TTGGCCGGCT GATGCGGGTG ATCTGGCTGA CGCCCGCCAT GGACCGGCTG
TGGACCGATG CCCCGGAACA GCGGCGGCGA TTCCTGGACC GGGTGACGCT CAGCTTCACG
CCGGGCCATG CCGAGGACGC GCTGGGTTAC GAAAAGGCCA TGCGCGAACG CAACCGGCTG
CTGCGCGACG AGGTCCGCGA CGCCGGCTGG TATCGCGCGC TGGAGGCACA GATGGCCGAG
ACGGGCGCGG CGCTGACGCG CAACCGCCTG GACGCCATCG CCCGGATCAT GGCGGCGCAG
GAGGGGGCCG GGACCGCCTT CCCCTCGGCC AGCCTGACGC TGTTGCCGGG CGAAGGTTCG
GCCGACGATC CCGACGCCGA GAGCATCGCC GCCCGGCTGG CCGAGGGCCG CGGCCGCGAC
ATGGCGGCCG GCCGCACCCT GACCGGCCCG CATCGCGCCG ACCTGGGGGC GCATTGGGGG
CCGCAGGCGA TGCCCGCCGC CCTTTCCTCA ACCGGCGAGC AAAAGGCGCT GCTCTTGTCG
CTGATCCTCG CCAATGCCCG GGCGCTGGCC GAGGAAAGCC CGGTGCTGCT GCTCGACGAG
GTGGCGGCGC ATCTGGATGC CGACCGCCGC GCAGCGCTTT ACGACGAGAT CTGCGCGCTT
CGCGCCCAGG CCTGGCTGAC CGGTACCGGG CCGGAACTGT TCGAGGCGCT ACGCGGCCGG
GCGCAATTTC TGGCGGTGGT GCGCGAGGCC GAGGCCTCGC GCATCATGGG TATTTGA
|
|---|
| Protein sequence | MTLSLLHLTQ FRSWARLEIE ADHRPVAIHG PNGAGKTNIL EAVSMLSPGR GMRGAAPGDQ
ARKGPEVGWQ IRAEIGTHQV LTRALPGQPR EVVIDEKPST QIALGRLMRV IWLTPAMDRL
WTDAPEQRRR FLDRVTLSFT PGHAEDALGY EKAMRERNRL LRDEVRDAGW YRALEAQMAE
TGAALTRNRL DAIARIMAAQ EGAGTAFPSA SLTLLPGEGS ADDPDAESIA ARLAEGRGRD
MAAGRTLTGP HRADLGAHWG PQAMPAALSS TGEQKALLLS LILANARALA EESPVLLLDE
VAAHLDADRR AALYDEICAL RAQAWLTGTG PELFEALRGR AQFLAVVREA EASRIMGI
|
|---|
| |