| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2800 |
|---|
| Symbol | |
|---|
| ID | 4581379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2821634 |
|---|
| End bp | 2822389 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639770126 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916580 |
|---|
| Protein GI | 119385524 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3698] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.462048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG ATCTCAAGCG CCGGCTGGGC CTGGCCTTTG GCGCGCTGAT CGCCATGACC
CTGCCCGCCC TGGCCGGGAT CTGCGAAAAG CGCGACTTCG ACGGGCAGGG CTATGTGATC
TGCACGCTGA CGGCGGGGCA GGAGCCGGGC CTGCGGCTGT GGCTGAACGG CCCGGATGGC
CGGACGCTCG GCGATTTCAC CGCCGTCCGC CGCACCCTGG CCCAAGGCGA AAGCCTGGGT
TTCGCCATGA ATGCCGGCAT GTATCACCCG GATTTCACCC CGGTCGGGCT TTACGTCAGC
GACGGCGTCA GCCAGCACGA CCTGGTCACT GCCGGCGGCG GCGGCAATTT CGGCATGTTG
CCGAACGGCG TCTTTTGCGC CGGCGGCGCG CGGCCCTATC AGGTGATCGA AAGCCGCGCC
TTTGCCAAGG CCGCCCCGGA TTGCCGCCTC GCCACGCAAT CGGGGCCGAT GCTGGTCATC
GACGGCGCGC TGCACCCGCG TTTCCTGGTG GACAGCGACA GCCGCTATAT CAGGAACGGC
GTCGGCGTCT CGCCCGACGG ACAGACGGCA TGGTTCGCCA TCTCGGACCG GGCGGTGACC
TTTCACCAGT TCGGCCGGCT GTTCCGCGAC GGGCTGGGGG CGCGGGATGC GCTGTATTTC
GACGGCTCGA TTTCGCGGCT ATACGCCCCG GGCCTGGGCC GCGCCGATTT CGGGCGGCGG
CTGGGGCCGA TCATCGGATA TGTAGGACAG AACTAG
|
|---|
| Protein sequence | MKIDLKRRLG LAFGALIAMT LPALAGICEK RDFDGQGYVI CTLTAGQEPG LRLWLNGPDG
RTLGDFTAVR RTLAQGESLG FAMNAGMYHP DFTPVGLYVS DGVSQHDLVT AGGGGNFGML
PNGVFCAGGA RPYQVIESRA FAKAAPDCRL ATQSGPMLVI DGALHPRFLV DSDSRYIRNG
VGVSPDGQTA WFAISDRAVT FHQFGRLFRD GLGARDALYF DGSISRLYAP GLGRADFGRR
LGPIIGYVGQ N
|
|---|
| |