Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2675 |
Symbol | |
ID | 4581220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2687928 |
End bp | 2689010 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770004 |
Product | secretion protein HlyD family protein |
Protein accession | YP_916458 |
Protein GI | 119385402 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA ACCACCTTAT CCCGACGCTG ATTGCCCTGG CGGCCGGCCT GGCCGGCCTG TTGATCGTGC TTTACGCCTG GCACCTGCCG CCATTCCGTC CGGCGCATCC GCAGACCGAG AACGCCTATA TCCGCGGCCA GCTGACCACC ATCGCGCCGC AGCTTTCCGG CTATGTCGCG GCAGTCGAGG TGCGGGACTT CCAGCCCGTG ACCCGCGACC AGGTCATCGC CCGCATCGAC GACCGGCAAT ATCGCCAGAA GCTTGCGCAG GCCCAGGCCG TGCAGCAAGG CGCCGAAGCG GCGCTGGAGA TCCAGAGCCA GGGCGTCCAT TCCGCCCGGG CCAGCCTGCA ATCGGCCCAG GCCGCGCTGA CGGCGGCACA GGCGGCGCGG GATACGGCGG GATCGACCTG GGACCGCGCG CAGGCCCTGC AATCGCGCGG CGTCACGGCG CAAAGCTCGG CCGACCAGAC CGAGCTGGCG CTGCGTCAGG CCGAAGCCGC CGTCACCCAA GCCGAAAGCG CCATCGCGGT CGCACGCGAG AACGTCAAGG GCGCCGAGGT GGGGCTGGCC GCGAAACGCG CCGAGATCGC CTCGGCCAAG GCGGCGGTGG AACTGGCGCG GATCGACCTG GACAACACGG TGATCCGCGC GCCATCGGAC GGCCGGCTGG GCCAGGTCGG CGTGCGCGTC GGCCAATATG TCACCGCCGG CACGGCGCTG GTCAGCCATG TCGGCCCCGA GGTCTGGGTC ATCGCCAATT TCCGCGAGAC CGAGTTGCAC GGCATCCGCA TCGGCGACCG CGCCACCTTC ACCGTGGACG CCATGCAGCA CCGCTCCTTC ACCGGGCGGG TCGAGGCGTT CTCGCCTGCC ACGGCCTCGG AATTCAGCCT GTTGTCCGCG TCCAATGCCA CGGGCAACTT CACCAAGGTC GCGCAACGCC TGCCGGTGCG CATCGCGATC GATCCGGGGC AGGAGATGGC CGAGTATCTG GAGCCGGGCC TGTCGGTGGT GGTGACGGTG GACGAGGGTT CGGGCGCCGA CCGTTCGGCC CAGGCCCGGC CGATCATGGG GCATGAGGGC TGA
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Protein sequence | MTKNHLIPTL IALAAGLAGL LIVLYAWHLP PFRPAHPQTE NAYIRGQLTT IAPQLSGYVA AVEVRDFQPV TRDQVIARID DRQYRQKLAQ AQAVQQGAEA ALEIQSQGVH SARASLQSAQ AALTAAQAAR DTAGSTWDRA QALQSRGVTA QSSADQTELA LRQAEAAVTQ AESAIAVARE NVKGAEVGLA AKRAEIASAK AAVELARIDL DNTVIRAPSD GRLGQVGVRV GQYVTAGTAL VSHVGPEVWV IANFRETELH GIRIGDRATF TVDAMQHRSF TGRVEAFSPA TASEFSLLSA SNATGNFTKV AQRLPVRIAI DPGQEMAEYL EPGLSVVVTV DEGSGADRSA QARPIMGHEG
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