Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2559 |
Symbol | |
ID | 4579864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2569780 |
End bp | 2570709 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639769888 |
Product | auxin efflux carrier |
Protein accession | YP_916342 |
Protein GI | 119385286 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.324352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCGA TCTTCCTGAA GACCCTGCCG TTCTTTCTCG TCATCGGCAC GGGCTGGCTG GCCGGGCGCA CGCGCTTTTT CCCGCCCGAG GCCACCGGCT GGCTGACGAA ATTCGTCTTC TACTTCGCGC TGTCGGCCAT GCTGTTCCGC TTTGCCGCGA CGCTGGATGT GGCCAGCCTC TTCGACCCGG CCTTCGTCAT GGCCTATCTT TGCGGCTCGG CCGCGCTTTG GGCCCTGGGT TTCGCGGTGG CGCGCTGGCG CCGCCAGCCG CTGGTCACCG CGGCGATGGA GGCGCATACG GCAATGACCG GCAATACCGG CTTTCTAGGC GTGCCGATGC TGGTCGTGCT GCTGGGCGAA CGCGCCATCG GCCCGGTGCT GATGGTGCTG ACCATCGACA TGGTGGTGTT CTCGACGCTG ATCACCCTGA TCGTCACCGC GGCAAGGCAG GGGCGGGTAC GGCTGGCGAC GCTGTGGCCC CTGCTGCGCG GCATCGTCTC GAACCCGATG ATCGTCTCGA TGCTGGCGGG ACTGGCCTGG GCCGGGCTGC ACCTGCCGAT GCCGGGGCCG CTGGACGAAT TCCTGGCACT CTTGGGCGCC TCGGCCACGC CGGGGGCGCT GTTCGCCATC GGCGCCAGCC TGGCCGGACG CGCGGCCGAG CGCATGGGCC CGGCGCTTTG GCTCAGCCTC GCCAAGCTGG TGCTGCACCC GCTGGCGGTG GGCATCGCCG CGCTGGCGGT ATTCGGGGTC GAGCCCTATG CGGCGGGCGT GATGATCGCC GCCGCCAGCC TGCCGGTCGC GGGCAACGTC TATATCCTCG CGCAATATTT CGGCACCGCC GTGCAGCGCG TCTCGGCCGC CATCCTGATC TCGACCGCGG CGAGCATCGC CACGGTTCCC GTCGTCATTC ACTGGATCAC GAAAGGCTAG
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Protein sequence | MLAIFLKTLP FFLVIGTGWL AGRTRFFPPE ATGWLTKFVF YFALSAMLFR FAATLDVASL FDPAFVMAYL CGSAALWALG FAVARWRRQP LVTAAMEAHT AMTGNTGFLG VPMLVVLLGE RAIGPVLMVL TIDMVVFSTL ITLIVTAARQ GRVRLATLWP LLRGIVSNPM IVSMLAGLAW AGLHLPMPGP LDEFLALLGA SATPGALFAI GASLAGRAAE RMGPALWLSL AKLVLHPLAV GIAALAVFGV EPYAAGVMIA AASLPVAGNV YILAQYFGTA VQRVSAAILI STAASIATVP VVIHWITKG
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