Gene Pden_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2540 
Symbol 
ID4579845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2553578 
End bp2554351 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID639769869 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_916323 
Protein GI119385267 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.789222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC ATTTCATCGG CGCCGGCCCG GGCGCGGCCG ACCTGATCAC CCTGCGCGGC 
CGCGACCTGA TCGCGTCCTG CCCGGTCTGC CTTTATGCCG GCTCGCTGGT GCCGCAGGCG
CTGCTGGGCC ATTGCCCACC CGGCGCGCGG ATCGTGAACA CCGCGCCCAT GGACCTCGAC
CAGATCGTCG CCGAGATCGC CGCCGCGCAT CAGGCGGGCC ATGACGTGGC GCGGCTGCAT
TCGGGCGACC TGTCGGTCTG GTCGGCCATG GGCGAGCAAC TCCGCCGGCT GCGCGAGCTG
GGCATCCCCT ATGACGTGAC GCCCGGCGTG CCGTCATTCG CCGCCGCCGC CGCCGCGCTG
GGGGCCGAAC TGACCCTGCC GGGTGTGGCG CAATCGGTGG TGCTGACCCG CACCTCGGGC
CGCGCATCGG CCATGCCCGA GGGCGAGACG CTTGCCAATT TCGCCGCCAC CGGCGCCACG
CTGGCGATCC ACCTGTCGGT GCATGTGCTG GACCGCGTGC AAGCGGAACT GGTCCCGCAT
TACGGCGCCG ATTGCCCGGT CGCCGTGGTG TTCCGCGCCA GCTGGCCCGA CCAGCGCATC
CACCGCGCCA CGCTGGGCAC GCTGGACCCC GCCATCGGCG AGGGCGAGCG CACGGCGCTG
ATTCTGGTCG GCCGGGCGCT GGCGGCGGAG GGTTTCGACG AAAGCCGCCT CTATGCCGGC
GACTACGACC GCCGCTTTCG CCCCGTCGGC ACCGCACCGA GGTTCCCGGA ATGA
 
Protein sequence
MTVHFIGAGP GAADLITLRG RDLIASCPVC LYAGSLVPQA LLGHCPPGAR IVNTAPMDLD 
QIVAEIAAAH QAGHDVARLH SGDLSVWSAM GEQLRRLREL GIPYDVTPGV PSFAAAAAAL
GAELTLPGVA QSVVLTRTSG RASAMPEGET LANFAATGAT LAIHLSVHVL DRVQAELVPH
YGADCPVAVV FRASWPDQRI HRATLGTLDP AIGEGERTAL ILVGRALAAE GFDESRLYAG
DYDRRFRPVG TAPRFPE