Gene Pden_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2509 
Symbol 
ID4580147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2528640 
End bp2529131 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID639769838 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_916292 
Protein GI119385236 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.815631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.83484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG ATCTGCTGGG CCCCTCGGGC CTGCCTTACC GGCCTTGCGC CGGGGTGGTG 
CTGATCAACC CGGTGGGGCT GGTCTTTGCC GGGCAGCGCA TCGACAATCC CGGCCCGGCT
TGGCAGATGC CGCAAGGCGG CATCGACCGG GGCGAAAGCC CGCGCGAGGC GGCCCTGCGC
GAACTGGTCG AGGAGACCGG CGTCACCCCC GACCTGGTCG ATGTGCTGGC CGAGACGCCC
GGCTGGGTGA CCTATGACCT GCCGCCGGAA CTGCTGGGCA AGGTCTGGAA GGGACGCTAT
GGCGGCCAGA AGCAGAAATG GTTCGCCATG CGCTTCCTGG GCGAGGATTC GGCAGTGCGG
ATCGCCACCG AGCACCCGGA ATTCGAGCGT TGGCAATGGA TGCGGGCGGC GGATCTGATC
GACGGCATCG TGCCCTTCAA GCGCGATGTC TATGCCCGGG TTCTGAGCGA TTTCCGCGAG
ATCCTGGCCT GA
 
Protein sequence
MSADLLGPSG LPYRPCAGVV LINPVGLVFA GQRIDNPGPA WQMPQGGIDR GESPREAALR 
ELVEETGVTP DLVDVLAETP GWVTYDLPPE LLGKVWKGRY GGQKQKWFAM RFLGEDSAVR
IATEHPEFER WQWMRAADLI DGIVPFKRDV YARVLSDFRE ILA