Gene Pden_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2502 
Symbol 
ID4580140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2520515 
End bp2521273 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID639769831 
Producthypothetical protein 
Protein accessionYP_916285 
Protein GI119385229 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.656569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.915417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC TCTCCCTCGA CCTCGTGCTG CTGCTGGCCG GCGCCGCATT CGCCGCCGGC 
TTCGTCGATG CCATCGCCGG CGGAGGCGGG TTGATCACCG TCCCCGCCCT GATGCTGGCC
GGCCTGCCCC CGGCGCAGGC GCTGGCCACC AACAAGGTGC AGGGCGTCTT CGGTGCGGCG
ACTGCGGCGA TCTCCTATGC CCGGCGCGGG TTGGTGGACC TGCGCCAGCA GACCGGCGCG
GCGGCGGTGG CATTCGCGGC CGGGCTTTGC GGCGCGCTGC TGGTGACATG GCTCCCGGCG
CAGGCGTTGC GCTATGGCTT GCCGGTGGTG CTGATCGGCA TCGCCGCGTT CTTCGCCCTG
CGACCGGGAC TGGACGATAC CGACCGCATG CGCCGCATCG CCCCCGCGGC CTTTACCGCC
ACGGTCGTTC CCATCGTCGC CTTTTACGAC GGGCTGGTCG GGCCGGGCAC GGGTTCCTTC
TTCATGCTGG GCTTCGTCAT GCTGGCGGGC TACGGCATCC TCAAGGCAAC GGCGCACACG
AAGCTGCTGA ACTTCGCCTC GAACCTGGGC GGGCTGGTCG CCTTTGCCGC TGTGGGCAAG
CCGCTCTGGC TGGTCGGCGC AGTCATGGCA CTGGCGCAGA TCGGCGGCGC CATGCTGGGC
GCACGACTGG CGATGCGAAC CGGAGCGCGG GTCATCAAGC CGCTGCTGGT CGTGACCTCG
ACCGCACTGG CACTGCGGCT GATCTGGCAG CTTCTGTAA
 
Protein sequence
MFELSLDLVL LLAGAAFAAG FVDAIAGGGG LITVPALMLA GLPPAQALAT NKVQGVFGAA 
TAAISYARRG LVDLRQQTGA AAVAFAAGLC GALLVTWLPA QALRYGLPVV LIGIAAFFAL
RPGLDDTDRM RRIAPAAFTA TVVPIVAFYD GLVGPGTGSF FMLGFVMLAG YGILKATAHT
KLLNFASNLG GLVAFAAVGK PLWLVGAVMA LAQIGGAMLG ARLAMRTGAR VIKPLLVVTS
TALALRLIWQ LL