Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2501 |
Symbol | xerC |
ID | 4580139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2519411 |
End bp | 2520349 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639769830 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_916284 |
Protein GI | 119385228 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.504706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.936606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG GGGCCGAGCT TTTGGCGCTG GCCCCGGCCA TGGCCGACAA TCTCGAGCGT TGGCTGGCCA GCGAGCGGGC TGCGCGCGAC CGCTCGGACC ACACGATCCG CGCCTATCAG GCCGACCTGC TGGCCTTCCT GACCTTCCTC GGCAGCTATC ACGGCACGCC CGCCCTGCCC GCGACGCTGG CCGGGCTGAC GCAGACCGAC ATGCGCGCCT TTGCCGCCGC CGAGCGCGGG CGGGGGCTTT CGGCTCGCTC GCTCGCGCGG AGGCTCTCGG CCACACGCAG CTTCATCCGC TGGATGTCGG ACCGGCACGG CTTCGACGCT TCCAGGGCGC TGGCCTCGCG CGGGCCGAAA TACACCCGCT CGCTGCCTCG CCCACTGGCG CCGGAACAGG CGCAGGACGT GCTGGAAATC ACCGGCAGCA CCCATCCCGA AGCCTGGATC GCGACCCGCG ACGCGGCGGT GCTGACGCTG CTCTGGGGCT GCGGGCTGCG CATCTCCGAG GCGCTGGGGC TGAACGGCGC CGACTGGCCG CTGCGCGAGG CGCTGACCAT CCGCGGCAAG GGCGGGCGCG AAAGGCAGGT GCCGGTCCTG CCCATCGCGC GCGAGGCCAT CGCCGATTAC CTGCGCCTCT GCCCCTATCC GCTGCAAGCC AAGGCTCCGC TGTTTCGCGG CGCTCGTGGC GGTCGGCTCA GCCCGACGCT GATCTCGGGC GCGATGCGAC AGGCAAGACA GGTGCTGGGC CTGCCGCCGA CCGCGACCCC GCATGCGCTG CGCCACTCCT TCGCCACGCA TCTGCTGACT GCGGGCGGCG ATCTGCGCAC GATCCAGGAA CTCCTGGGCC ATGCCAGCTT GTCCACGACC CAGGTCTATA CCGGCGTGGA CGACGCCCAC CTGCTGGCGG TCTATCGCGC CGCCCACCCC CGCGCCTGA
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Protein sequence | MTGGAELLAL APAMADNLER WLASERAARD RSDHTIRAYQ ADLLAFLTFL GSYHGTPALP ATLAGLTQTD MRAFAAAERG RGLSARSLAR RLSATRSFIR WMSDRHGFDA SRALASRGPK YTRSLPRPLA PEQAQDVLEI TGSTHPEAWI ATRDAAVLTL LWGCGLRISE ALGLNGADWP LREALTIRGK GGRERQVPVL PIAREAIADY LRLCPYPLQA KAPLFRGARG GRLSPTLISG AMRQARQVLG LPPTATPHAL RHSFATHLLT AGGDLRTIQE LLGHASLSTT QVYTGVDDAH LLAVYRAAHP RA
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