Gene Pden_2441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2441 
Symbol 
ID4580774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2445389 
End bp2447494 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content74% 
IMG OID639769770 
Productprotein kinase 
Protein accessionYP_916224 
Protein GI119385168 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.77399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.905473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGG CCCTGCCGGG GGACATCTTC CACGAGGGCC AGGTGCTCAA CAACACCTGG 
ACCGTCGAGG GTGTGTTGGG GCGCGGCGGC ACCGGCGAGG TCTATCGCGC GAAAAGCCTG
GTCACCGGCC GGGTGGTGGC GATCAAGGCG CTTTCGGCCG GATTCTCGGG CGACGAGGGC
TATCTGGAGC TGATGCGCCG CGAAGAGGCG ATGCGCGACA TCCTGCACGA TGCCGTGGTG
CGCTACAGCG ACTGCTCGCG CACGCCCGAG GGCCATGTCT TCCTGGTGAT GGACTTCATC
GACGGCCCGG CCCTGTCCGA GGCGATGGCC GAGCGGCGGC TGGGGATGCG CGAATTGCTG
ATCGTGGCGC ATCGCGTGGC CGAGGGGCTG GTGGCCGCCC ATGCCCGCGG CGTGGTGCAT
CGCGACCTGT CGCCGGACAA CGTGATCCTG CGCGACGGCC GGGTCGAGGG CGCGACGGTG
ATCGACTTCG GCATCGCCAA GGACACCGCC GCCGGCGCGC ATACGGTCGT CGGCAACCAG
TTCGCCGGCA AATACGAATA TGCCGCGCCC GAACAGTTCG ACGGCAAGGC CGAGCCGGCC
AGCGACCTCT ATGCGCTTGG CGCGTTGCTG CTGGCGGCGG CGCGGGGCGA GGTGCCCTTT
GCCGGCGCGA CGCCCGGCGA GATGATCCGG CGCAAGGCCG AGACCTTGGA CGTGACCGGC
CTGCCCGAGC CCCTTGCGGG GCTGATCCTG TGGCTTTCGG CGCCGCGCAT CGCCGAGCGC
GCGCCCTCGG CCGCGGCGGT GGTGGCACGG CTGGATGCGC TGCTGAAGGG GGCCGAGGCC
GCGCCGGCCC GCAAGGGCGC CACCCCGCGG CCGCAGCAGC GTCGGGCAGG GGGTGGGCGC
GGTCGGATAG GGATTATCCT GCTGGTGCTG GCCGTGGTGC TGGCGGGCGG ATTCTTCGCG
GCAAGGTCGC TGCTGGTCCC CGACCTGCCG CTGGTCCAGC CTTGGCGGCT GGAGGCGGCG
GGCGGCGAGG CGCCCCGGCT GGCCGGGCCG GCACCGGATA CCGCCAGCGC CGGACGAATC
GCGGCCGCCT TCGCCGCCGC AAACGGAGGC GATCCGCCGC CGGACGCGCT GTCCCCGGCG
CGCGGCATGC CGACACCGGG CTGGGCCGAG GCGGTGGAGC GGCTTTTCCC GGCACTGCAA
GGGCTGCAGG ACTGGACGGT TCTGGTCACC GACATGCGCG CCGAGGTCAC CGGCACCGCC
GCCACCCCGG CCGAGCGCGA CGCAGCCGCC GCCCGGCTGG CCGAATGGGC GCAGGCGACC
GGCATGGAAC TGGTGGCGCG GCTGGCCGCC GCCCCCGCCC TGCTGATGCC GGCCGATCTG
GACGCGCTGC TGGCCCATGC CGCCAGCTGC GGCCCGCTGG CCAGCGACCT GCCGCAAGGG
GGCGCCCCGC CCGGCGCCGG CGTGACGATC CGCGGCGCCT TGCCCGATGC AGCCGCCGCC
ACGGCGCTGG CCGAGACGCT GCGCCCGGCG CTTGGCGACC GCACCCTGCG ACTGGAGGTC
GAGACGCTCA GCCCCTCGCT CTGCAGGATC CTCGCCGCGG CCTCGGACCT GCCCGAGGGC
GGCATCGGCA TCCGCCTGGC CGAGGCGAAG CGGCCCGAGC CCTCGCTGAC CGGGATCTAT
CGGCCCGGCG ACAATCCGGT GGCCGATGTG CTGATCCCCG CCGAATTGGC GGCCACGCCC
GAGGCAGAGC TTTGGGTCGC GGTCGAGGAA ACCGGCCAGG TCTTCAACGT GCTGCCCAAT
GCCGGCGACC AGGAAACCCG GCTGGACCGC ATCGGCCGGC CCGAGGGCAC GCTGCGCCGC
GTGCGCGTGC TGTGGCCTGC CGACGATCCC GGCCTGGGCC AGGGGCGCAT CGCCTTTCGC
GTCAACGACC GCGATTTCGG CAAGGCGGGG ATCTTCGCCT TCGTGACCCG CGGCCCGCTT
TTCGACGAAC GCCGCCCGGG CGACGAATCC GCCGCCGCCT TTGCCGAGGC GCTGGCGGCA
CGCCGCGCGG CCCGGCCGGA CCTGATTCTG GCCGCCACCC ATCGCATCCT AGACCTGCGA
CCCTGA
 
Protein sequence
MIPALPGDIF HEGQVLNNTW TVEGVLGRGG TGEVYRAKSL VTGRVVAIKA LSAGFSGDEG 
YLELMRREEA MRDILHDAVV RYSDCSRTPE GHVFLVMDFI DGPALSEAMA ERRLGMRELL
IVAHRVAEGL VAAHARGVVH RDLSPDNVIL RDGRVEGATV IDFGIAKDTA AGAHTVVGNQ
FAGKYEYAAP EQFDGKAEPA SDLYALGALL LAAARGEVPF AGATPGEMIR RKAETLDVTG
LPEPLAGLIL WLSAPRIAER APSAAAVVAR LDALLKGAEA APARKGATPR PQQRRAGGGR
GRIGIILLVL AVVLAGGFFA ARSLLVPDLP LVQPWRLEAA GGEAPRLAGP APDTASAGRI
AAAFAAANGG DPPPDALSPA RGMPTPGWAE AVERLFPALQ GLQDWTVLVT DMRAEVTGTA
ATPAERDAAA ARLAEWAQAT GMELVARLAA APALLMPADL DALLAHAASC GPLASDLPQG
GAPPGAGVTI RGALPDAAAA TALAETLRPA LGDRTLRLEV ETLSPSLCRI LAAASDLPEG
GIGIRLAEAK RPEPSLTGIY RPGDNPVADV LIPAELAATP EAELWVAVEE TGQVFNVLPN
AGDQETRLDR IGRPEGTLRR VRVLWPADDP GLGQGRIAFR VNDRDFGKAG IFAFVTRGPL
FDERRPGDES AAAFAEALAA RRAARPDLIL AATHRILDLR P