Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2418 |
Symbol | |
ID | 4580752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2422453 |
End bp | 2423145 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769747 |
Product | phage integrase family protein |
Protein accession | YP_916202 |
Protein GI | 119385146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.349655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA ACACGCACCG CGTCCGCTTT GCCAATTACA TTCCGGTCGC GATCTCGATG ATCGCCAAGG AGGTCATTCG AAAGCGCTGG CTGACCGACA ATCCGGCCAA GGGAATCGAG CGGCTCAACG TACCAAAGAA TCGCCGGCAA CCACATATCC CCTGGCCGGA TATCGCAGTC CAGAAATGGC GAGCCGAGGC GGGGCCGCTG GAACGTCTGA TCTTCGAGAT CGGCGTCGGC AGTGTTCAGC GGCCCGGCGA TTGGGTCTGC TTCACCTGGG GCGACTATGA TCCAGCGGGC ACGGGCACGC TGAGGCTCCG CCAGAGCAAG GGCGACAAGC CCCTGATTCT GCCCTGCACC GAAGCCCTGA AAGCAGCGCT GGACGCCGCC AAGGCTGCCC TACCCTTTTC GCCTCTGCCA TCGCGGCACA TCATCACCAA GCAGGACGGC AGCCGGATGG ATTACCGGCG CATGGCAGAA ATCATGCTCA AGGAACGGCG GCGGCTCGGG CTGGAAGCCT ACGACCTGCA CGCCCTGCGC TATCGCGGTG TGATGGAACT CGCCTGGGCT GGCTGCGACG ACGATGAGAT CATGTCCTAC AGCGGGCACA GCACCAAGGC GATGGTGCGG AAATATGCCG GGGAAGCCCG GCAGATCATG CGGGCGCGAC AGGCCCGCGC CAAGCGGTGC TGA
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Protein sequence | MDKNTHRVRF ANYIPVAISM IAKEVIRKRW LTDNPAKGIE RLNVPKNRRQ PHIPWPDIAV QKWRAEAGPL ERLIFEIGVG SVQRPGDWVC FTWGDYDPAG TGTLRLRQSK GDKPLILPCT EALKAALDAA KAALPFSPLP SRHIITKQDG SRMDYRRMAE IMLKERRRLG LEAYDLHALR YRGVMELAWA GCDDDEIMSY SGHSTKAMVR KYAGEARQIM RARQARAKRC
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