Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2216 |
Symbol | |
ID | 4579192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2215573 |
End bp | 2216478 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639769546 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_916004 |
Protein GI | 119384948 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.239761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACT ACACCAACCT TCCGGCACCC AGCCCCGAAC AGGGCCTCAA CCGCTATTTG CAGGAGATCC GCAAGTTTCC CCTGCTGGAA CCGGAAGAGG AATACATGCT GGCCAAGGCC TGGGTCGACC ATCAGGACGC CGAGGCGGCC CAGAGGCTGG TGACGAGCCA CCTGCGGCTC GCCGCCAAGA TCGCCATGGG CTATCGCGGC TACGGCCTGC CGCAGGCCGA GGTCATTTCC GAGGCGAATG TGGGCCTGAT GCAGGCGGTC AAGCGCTTCG ACCCGGAAAA GGGCTTCCGC CTGGCCACCT ATGCCATGTG GTGGATCCGC GCCTCGATCC AGGAATATAT CCTGCGCTCG TGGTCGCTGG TGAAGATGGG CACCACCTCG GCCCAGAAGA AGCTGTTCTT CAACCTGCGC AAGGCCAAGT CCAAGCTGGG CGCGCTGGAA GAGGGCGACC TGCGCCCCGA AAACGTCACC CAGATCGCCC ATGACCTGAA CGTGACCGAG CAGGAGGTCA TCGACATGAA CCGCCGCCTG TCCAGCGGCG ATGCCTCGCT GAACGCGACG GTGGGCTCGG GCGATGGCGA ATCGACGGCG CAATGGCAGG ACTGGCTGGA GGACGAGGAC GCCAATCAGG CCGAGGCGTT CGCCGAGGCC GACGAATTGT CGGCGCGGCG CGAGATGCTG ATCGCCGCCA TGGACGTGCT GAACGACCGC GAAAAGGACA TCCTGATGGA GCGTCGCCTG CGCGACGATC CGATGACGCT GGAGGATCTT TCGACGCGCT ACGGGGTATC GCGCGAGCGC ATTCGCCAGA TCGAGGTCCG CGCCTTCGAG AAGCTGCAGA ACCGCATTCG GGAGCTGGCG CGCGAACGCG GCATGACCGT GCCCGAAAAC GCCTGA
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Protein sequence | MANYTNLPAP SPEQGLNRYL QEIRKFPLLE PEEEYMLAKA WVDHQDAEAA QRLVTSHLRL AAKIAMGYRG YGLPQAEVIS EANVGLMQAV KRFDPEKGFR LATYAMWWIR ASIQEYILRS WSLVKMGTTS AQKKLFFNLR KAKSKLGALE EGDLRPENVT QIAHDLNVTE QEVIDMNRRL SSGDASLNAT VGSGDGESTA QWQDWLEDED ANQAEAFAEA DELSARREML IAAMDVLNDR EKDILMERRL RDDPMTLEDL STRYGVSRER IRQIEVRAFE KLQNRIRELA RERGMTVPEN A
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