Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2149 |
Symbol | |
ID | 4579966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2149189 |
End bp | 2150142 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639769479 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_915937 |
Protein GI | 119384881 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.964128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTTC CGACCTATGC CTCGCCCTTG GAGAAGACCT GGCACTACGC CTATCTGGCG ATCTGCGCGG CGATCTTCTT CTTCCTGATC GCGCCGATCG TGGTGGTGAT CCCGCTGAGC TTCAACGCCG AGCCCTATTT CACCTTCACC GACCGGATGC TGTCCTTCGA CCCGGACGGC TATTCGCTGC GCTGGTACGA CAGCCTGCTG ACCTTCGGCA TGGCGCGGCC GGACGCGCCG CGCGACCTGA GCTGGTGGGC GGATGCCTGG CGGAACGCGA AATGGGTGAA TGCGGCGAAA AGCTCGATCA TCATCGGCTT TTTCTCGACC ATCCTGGCCA CGGTGCTGGG CACGCTGGCG GCGCTGGGGC TGTCGCGGCC CGAGATGCCG TATCGCCGGG CGATCATGGC GGTGCTGATC TCGCCGATGA TCGTGCCGAT CATCATCACC GCGACGGGGA TGTTCTTCTT CTACTCGAAC CCCTGCGAGC CCCTGACCTG GATCGGCCTG GACCCGCAAT GCGGCCGGCT GGCGGGCACC TATCTGGGGG TGATCCTGGC CCATGCCACG CTGGGCATTC CCTTCGTGAT CATCACGGTG ACGGCGACGC TGATCGGCTT CGACCAGTCG CTGAACCGGG CGGCGGCGAG CCTGGGGGCG AACCCGCGCA CGACCTTCTT CCGCATCACC ATGCCCCTGA TCCTGCCCGG GGTGATCTCG GGGGCGCTGT TCGCCTTCGT GACCTCCTTC GACGAGGTGG TGGCGGTGCT GTTCATCGCC GGGCCGGACC AGCAGACCAT CCCGCGCCAG ATGTGGAACG GCATCCGCGA GCAGATCTCG CCCGCCATCC TCGCCGTCGC CACGCTGCTG GTCATCTTCT CCATCGCGCT CCTCACAACC GTCGAGATGC TCAGAAGAAG ATCCGAAAAA CTCAGAGGGC TGACCCCAGG GTAA
|
Protein sequence | MALPTYASPL EKTWHYAYLA ICAAIFFFLI APIVVVIPLS FNAEPYFTFT DRMLSFDPDG YSLRWYDSLL TFGMARPDAP RDLSWWADAW RNAKWVNAAK SSIIIGFFST ILATVLGTLA ALGLSRPEMP YRRAIMAVLI SPMIVPIIIT ATGMFFFYSN PCEPLTWIGL DPQCGRLAGT YLGVILAHAT LGIPFVIITV TATLIGFDQS LNRAAASLGA NPRTTFFRIT MPLILPGVIS GALFAFVTSF DEVVAVLFIA GPDQQTIPRQ MWNGIREQIS PAILAVATLL VIFSIALLTT VEMLRRRSEK LRGLTPG
|
| |