Gene Pden_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2096 
Symbol 
ID4579893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2099616 
End bp2100158 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID639769426 
Producthypothetical protein 
Protein accessionYP_915884 
Protein GI119384828 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.287519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA AGAAACCCGA GACCCAGCCC CGCCGCCGGA TGCGCGGCTT CGAGGCGGCG 
GCCCAACTGG TCGCGCAGCG GGTCAAGGCG GTCGGCGAAA GCCGGGGCTT CGCCACGGCC
CGGCTGTTGA CCCATTGGTC CGAGGTGGTC GGTCCCGAAC TTGCCGCCCG GACCCGCCCG
GTCAAGATCA GCCATGGCAA GGGCCTGGGC GCCACGCTGA CGCTGCTGGT GCCGGGTGCG
CAGGCGCCGC TGATCGGCAT GCAGCTGGAC CAGATCCGCG AGCGGGTGAA CGCCTGCTAC
GGCTTCAACG CCGTCTCGCG CATCGTGCTT ACGCAGACCG CACCAACCGG TTTTGCCGAG
GGGCAGGCCG AGTTCATTGC CGCGCCGCCC CGAACGCCGC CGCCGCCCGA TCCGCAGAAG
ATCGCCCAGG CTGACGACAT CGCTTCGGGC TTCGACCATC CTGCGCTGTC CGCCGCCATG
CGGCGGCTGG CGCTGAACAT CCTGTCCCGC CGGGACACCA ACGACCGAAA GGCCAATCCA
TGA
 
Protein sequence
MAQKKPETQP RRRMRGFEAA AQLVAQRVKA VGESRGFATA RLLTHWSEVV GPELAARTRP 
VKISHGKGLG ATLTLLVPGA QAPLIGMQLD QIRERVNACY GFNAVSRIVL TQTAPTGFAE
GQAEFIAAPP RTPPPPDPQK IAQADDIASG FDHPALSAAM RRLALNILSR RDTNDRKANP