Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2090 |
Symbol | |
ID | 4578954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2092962 |
End bp | 2094764 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639769420 |
Product | hypothetical protein |
Protein accession | YP_915878 |
Protein GI | 119384822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0662343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.183735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTAA ATGATTTTCA CCGCAACTTT CGTTCCGATC TGCAGACCAT CATCGCCGAG CGCGTAGAAG CCGGCGAAGG CCCATTTCCT TCGGATGAGC TCGTTTTTGC GGAAATGGTC ATGGAGCATG TCGCAGAAAC CGGGATCTGC GAGGCACCAA CCGTTTGCCA CTGGAGCGGC AAGGTCGGCA ACGCGAAACT CCGCATTACG GGCTATGCGC TCAGCTCTGA TGAAACGGCT CTCGACCTCT TCGTGACCCA CTATTTCGGG ACCGAAGAAC TGAACGATCT CAGGGACTCG GATGCCACCG CAACCGCAAG CGAAGGCGTT CGCTTTCTGT TTCGAGCGGC AAGCGGCAAC CTCGATGCAA GGATCGATCC GACGCATCCG GTCAGGGATC TGGTTGCGAC CATTCGTTCT CGCTGGGGCG ACATCGACCG ACTTCGTGTA TTCGTGATCA CGGATGGCAA GACCAAGACC AAGCGGTTCT CGAACAAAGA GGTTCACCAG AAGATGGTGG CCGTCGAGGC CATGGATATG GAGAGGCTGT TCCGCCACAC CGAGGGCAAA CCGCGAGACG AACTGGCCGT AAGTTTCGTC CAGTCGATTG GTCGGGCGCT TCCCTGCGTA CATGTCCCAG ACCCTGACGC TGACTACGAG TATGCCCTAA CTGCCATTCC CGGGCAGCTC ATTCGGGATC TCTATCTGCG CTACGGGACG ACGCTGCTCG AAGCCAATAT TCGCACCTTT CTGGGGAACA AGCGCGCGGT CAACAAGGGC ATCGTCGAAA CGCTGCGAAA GGAACCGGAG CACTTCCTCG CCTTCAACAA TGGCCTCGTG CTTGTCTGCG ACGAAGCGGC CTTCGAGCGG ACCGAGGACG GGAATCTGGG CCTGTCCTTC CTGAAGGGTC TGCAGATCGT GAACGGCGGC CAGACGACCT CGACCATCTA CTTCTCATCC CGCGATGATC GCACGATCGA TCTCAGTCAT GTCATGGTCC CGGCCAAGAT CATCATCCTC AAGGGATCGC AGGACGAAGC GCGCGAGAGA CTAATCAGCA ACGTGTCACG GTATGCGAAC AGTCAGAACG CGGTGAAAAT GTCCGACTTG TCGGCGAACC GCCCGTTCCA TCGAGAGCTT GAGAAACTCG CGAACGACAC CTGGTGCCCT GACGGTGCAA CGCGATGGTT CTACGAGCGT GCAGCTGGCG CCTACAACGT CATGCTGCTG AGGGAAGGCA CCACGCCCGC GAAGAGGCGG AACCTGAAAG AGATGGTCCC GCCGAAACGC AAGCTGACCA AGAACGACAT CGCGAAGTAC CATGAAGCGT GGCGCGGCAA GCCGAACCAG GTCGCCATGG CTGGCGAGAA GAACTTCGCG GCCTTCATGG CTGCACTCGA TGATGATCCG ACCATTGTCC CGAGCCCGCT CGATGCCCGT TGGTATCGGG CGATGATCGC CAAGGTCATT CTGTTCAAGG CGATCGAGAG CATGATCAAG ACGAAGGAGG CGAAAGAGGT GTTCCGCCAA GGATGGGTGA ACATCGCAAC CTACGTTGTG TCGGTGGTCG CGGATCGACT CGGCGACAGG CTGGACCTCG AGCAGATCTG GATGCGACAG GGTATTTCTG GCGGTCTGCG CGACCTGCTC TGGGACTGGG CCGTGGTCGT GAACGCCGAG TTCAACAGGA TTGCCCCGGG CCAGCAGATT TCGGAAGTGG CGAAGCGTGC GGACACGTGG GCTAAAGTCA GAGCGGCGGA CTACTCGCCT CATTCCTTGT CCATTCCTGA AATCAAGCAA TAG
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Protein sequence | MSLNDFHRNF RSDLQTIIAE RVEAGEGPFP SDELVFAEMV MEHVAETGIC EAPTVCHWSG KVGNAKLRIT GYALSSDETA LDLFVTHYFG TEELNDLRDS DATATASEGV RFLFRAASGN LDARIDPTHP VRDLVATIRS RWGDIDRLRV FVITDGKTKT KRFSNKEVHQ KMVAVEAMDM ERLFRHTEGK PRDELAVSFV QSIGRALPCV HVPDPDADYE YALTAIPGQL IRDLYLRYGT TLLEANIRTF LGNKRAVNKG IVETLRKEPE HFLAFNNGLV LVCDEAAFER TEDGNLGLSF LKGLQIVNGG QTTSTIYFSS RDDRTIDLSH VMVPAKIIIL KGSQDEARER LISNVSRYAN SQNAVKMSDL SANRPFHREL EKLANDTWCP DGATRWFYER AAGAYNVMLL REGTTPAKRR NLKEMVPPKR KLTKNDIAKY HEAWRGKPNQ VAMAGEKNFA AFMAALDDDP TIVPSPLDAR WYRAMIAKVI LFKAIESMIK TKEAKEVFRQ GWVNIATYVV SVVADRLGDR LDLEQIWMRQ GISGGLRDLL WDWAVVVNAE FNRIAPGQQI SEVAKRADTW AKVRAADYSP HSLSIPEIKQ
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