Gene Pden_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2034 
Symbol 
ID4580418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2042017 
End bp2042622 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID639769363 
Producttoluene tolerance family protein 
Protein accessionYP_915822 
Protein GI119384766 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.601085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0517014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTTA TGCCGAATGA CACCCGCCGC GGGTTCCTGG CCCTGATCGG TGCGGGGCTG 
GCGGTCGCCG CCCGGCCTGC CTGGGCGCTG GATACCGGCG AGGCGCGGTC GCTGATCGAA
CAATCCCTGG CCGAGGTCTA TGCCGTGATT AATTCCGGCC AGCCCGCGCC GCAGATGTAT
CGCGCCTTCG AGGCGATCTT CGCGCGCTAT GCGGATGTGG AGATCATCGC CCGCTCGGCG
CTGGGGCCGG CTGCGCGCCA GGCCGGTGCG GCCGAGTTCG CCGCCTATCG CCAGGCGTTC
CAGGGCTATA TCGGCCGCAA ATACGGCAAG CGCTTCCGCG AATTCATCGG CTCGAAGATC
GAGGTGACGG GCGCAAAGCC GGTGAAATCC TTCTTTGCCG TGACCTCGGT CGCCTATCTC
AAGGGGCGCA GCCCGATGGA GGTCGAGTGG CATGTCTCGG ACAAGTCCGG GGAAAGCCGC
TATTTCAACA TCATCATCGA GGGGGTGAAC ATGCTCGCGT CGGAGCGCGC CGAGATCGGG
GCGATGCTGG CGCGGCGCAA GGGTGATCTG GCGGCGCTGA CGGCGGATCT GCAACAGGCG
GGCTGA
 
Protein sequence
MTLMPNDTRR GFLALIGAGL AVAARPAWAL DTGEARSLIE QSLAEVYAVI NSGQPAPQMY 
RAFEAIFARY ADVEIIARSA LGPAARQAGA AEFAAYRQAF QGYIGRKYGK RFREFIGSKI
EVTGAKPVKS FFAVTSVAYL KGRSPMEVEW HVSDKSGESR YFNIIIEGVN MLASERAEIG
AMLARRKGDL AALTADLQQA G