Gene Pden_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2018 
Symbol 
ID4580402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2024436 
End bp2025395 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content72% 
IMG OID639769347 
ProductZinc finger-domain-containing protein 
Protein accessionYP_915806 
Protein GI119384750 
COG category 
COG ID 
TIGRFAM ID[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.574059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.668736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA CCTGCCCCCG CTGCGCAGCC CAATACGAGA TTGCGGAATC CGCCATTCCC 
GCCTCGGGGC GCGAGGTCGA ATGCTCGGCC TGTGGCCATG TCTGGCGCCA GCCAAGGCCC
GGAAAATCCG CCTTGCCGCC CGAAGCCGGC CCGCGCGACC CCCATGCCCC CGAGGCACGC
CCGGTGCTGA ACCGGCCGCT GGACGAATCG GTGCTGGCCA TCCTGCGCGA AGAGGCCGCC
CGGGAATTGC GCGCCCGCCA GACGGAAATG CGCCCGCCCA CCGCCGATCA CAATCCCGCG
AAGCCGGTGG CCGAAGCGCC GCAGGACATG CCGGACGCAG CCCGGCCGGA ACACGCCGCA
GCGGAAAGCG GGACAGAGGC CGAGCCGCTG GTCGACTGGC CCGCCGTGAC CGTGACCGAG
GCCGGCCACG CCTCCTTGCC CGACAAGACT TCCGTTGAAA GACCCGTTGA GGCTCCTACT
GAGACCCAGG CCGCTCCCCT GCCCGAAAGT CCGGGCGCAG CCGATCCGGC CCTTGACCCT
GCACCGCAGG ATCGGCCCCA GCCGGTAGCG GCCCCCGTCC TGCCCGATGC CGAGGAACTG
GCCGCCACCC TGACCCGCTC GGTCACGCCG CAGCCCGATG CGGCAACCCA GGCCGAAGAA
CCGCCCTCGC CCGCCGCATC GCTGATCCGG CCCGCCGCGC CGGAAGCCGG ATCCGGCCAA
CCCGCCGAAA CCGGCAGCCT GCGCGAAGCA CCCGTCCCCG CCATCGTGCC GGTGCGACGC
GAAAGGACGG GCTATGCCAC GGGTTTCGGC CTTGCCGCCA TGCTGGCGCT GGGGGTGGTG
GCACTCTATG CGCTGGCGCC GCAGATCCCG GCCGATGAAG GCGGCAACTG GCTTGCCGGA
TTGCGCCAGC ACATCGATCA TGGCCGGCTC TGGCTGCACG ACCGCATCCT GGGCGAATAG
 
Protein sequence
MRLTCPRCAA QYEIAESAIP ASGREVECSA CGHVWRQPRP GKSALPPEAG PRDPHAPEAR 
PVLNRPLDES VLAILREEAA RELRARQTEM RPPTADHNPA KPVAEAPQDM PDAARPEHAA
AESGTEAEPL VDWPAVTVTE AGHASLPDKT SVERPVEAPT ETQAAPLPES PGAADPALDP
APQDRPQPVA APVLPDAEEL AATLTRSVTP QPDAATQAEE PPSPAASLIR PAAPEAGSGQ
PAETGSLREA PVPAIVPVRR ERTGYATGFG LAAMLALGVV ALYALAPQIP ADEGGNWLAG
LRQHIDHGRL WLHDRILGE