Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2018 |
Symbol | |
ID | 4580402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2024436 |
End bp | 2025395 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639769347 |
Product | Zinc finger-domain-containing protein |
Protein accession | YP_915806 |
Protein GI | 119384750 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.574059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.668736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTGA CCTGCCCCCG CTGCGCAGCC CAATACGAGA TTGCGGAATC CGCCATTCCC GCCTCGGGGC GCGAGGTCGA ATGCTCGGCC TGTGGCCATG TCTGGCGCCA GCCAAGGCCC GGAAAATCCG CCTTGCCGCC CGAAGCCGGC CCGCGCGACC CCCATGCCCC CGAGGCACGC CCGGTGCTGA ACCGGCCGCT GGACGAATCG GTGCTGGCCA TCCTGCGCGA AGAGGCCGCC CGGGAATTGC GCGCCCGCCA GACGGAAATG CGCCCGCCCA CCGCCGATCA CAATCCCGCG AAGCCGGTGG CCGAAGCGCC GCAGGACATG CCGGACGCAG CCCGGCCGGA ACACGCCGCA GCGGAAAGCG GGACAGAGGC CGAGCCGCTG GTCGACTGGC CCGCCGTGAC CGTGACCGAG GCCGGCCACG CCTCCTTGCC CGACAAGACT TCCGTTGAAA GACCCGTTGA GGCTCCTACT GAGACCCAGG CCGCTCCCCT GCCCGAAAGT CCGGGCGCAG CCGATCCGGC CCTTGACCCT GCACCGCAGG ATCGGCCCCA GCCGGTAGCG GCCCCCGTCC TGCCCGATGC CGAGGAACTG GCCGCCACCC TGACCCGCTC GGTCACGCCG CAGCCCGATG CGGCAACCCA GGCCGAAGAA CCGCCCTCGC CCGCCGCATC GCTGATCCGG CCCGCCGCGC CGGAAGCCGG ATCCGGCCAA CCCGCCGAAA CCGGCAGCCT GCGCGAAGCA CCCGTCCCCG CCATCGTGCC GGTGCGACGC GAAAGGACGG GCTATGCCAC GGGTTTCGGC CTTGCCGCCA TGCTGGCGCT GGGGGTGGTG GCACTCTATG CGCTGGCGCC GCAGATCCCG GCCGATGAAG GCGGCAACTG GCTTGCCGGA TTGCGCCAGC ACATCGATCA TGGCCGGCTC TGGCTGCACG ACCGCATCCT GGGCGAATAG
|
Protein sequence | MRLTCPRCAA QYEIAESAIP ASGREVECSA CGHVWRQPRP GKSALPPEAG PRDPHAPEAR PVLNRPLDES VLAILREEAA RELRARQTEM RPPTADHNPA KPVAEAPQDM PDAARPEHAA AESGTEAEPL VDWPAVTVTE AGHASLPDKT SVERPVEAPT ETQAAPLPES PGAADPALDP APQDRPQPVA APVLPDAEEL AATLTRSVTP QPDAATQAEE PPSPAASLIR PAAPEAGSGQ PAETGSLREA PVPAIVPVRR ERTGYATGFG LAAMLALGVV ALYALAPQIP ADEGGNWLAG LRQHIDHGRL WLHDRILGE
|
| |